C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, gamma isoform
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128309 Ppp1cc-009 ENSMUSG00000004455 10090 + 5:122158356-122175269 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000128309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000128309 11.842±5.29 9.954±2.06 15.603±1.91 20.229±0.00 10.455±1.91 11.107±3.29 4.598±0.56 6.011±0.65 9.021±4.37 12.822±0.37 18.487±3.55 7.110±2.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679
CIL_000903 CIL_000903_0002 VISTA 5:121732502-122333355
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312989 PPP1CA-002 protein_coding Homo_sapiens 0 477
ENST00000335007 PPP1CC-001 protein_coding Homo_sapiens 0 1123
ENST00000340766 PPP1CC-002 protein_coding Homo_sapiens 0 1123
ENST00000358239 PPP1CA-006 protein_coding Homo_sapiens 0 392
ENST00000376745 PPP1CA-001 protein_coding Homo_sapiens 0 490
ENST00000526510 PPP1CA-003 retained_intron Homo_sapiens 0 477
ENST00000527663 PPP1CA-007 protein_coding Homo_sapiens 0 311
ENST00000529724 PPP1CA-005 processed_transcript Homo_sapiens 0 202
ENST00000532279 PPP1CA-008 processed_transcript Homo_sapiens 6e-38 161
ENST00000532446 PPP1CA-004 processed_transcript Homo_sapiens 0 477
ENST00000537694 PPP1CA-009 processed_transcript Homo_sapiens 0 477
ENST00000546904 PPP1CC-008 retained_intron Homo_sapiens 0 697
ENST00000546933 PPP1CC-004 protein_coding Homo_sapiens 0 987
ENST00000550261 PPP1CC-005 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000550991 PPP1CC-010 protein_coding Homo_sapiens 0 1123
ENST00000551582 PPP1CC-007 protein_coding Homo_sapiens 0 361
ENST00000551676 PPP1CC-009 protein_coding Homo_sapiens 0 1212
ENST00000553024 PPP1CC-006 retained_intron Homo_sapiens 0 573
ENST00000620030 PPP1CC-011 non_stop_decay Homo_sapiens 0 558

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