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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | xeroderma pigmentosum, complementation group A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000130051  |
Xpa-006 |
ENSMUSG00000028329 |
10090 | - |
4:46184412-46186594  |
processed_transcript |
|
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009AQ | CIL_0009AQ_0002 | VISTA | 4:46052102-46653592 |
| CIL_000853 | CIL_000853_0002 | VISTA | 4:46066953-46671362 |
| CIL_0009AR | CIL_0009AR_0002 | VISTA | 4:46066953-46668597 |
| CIL_0002JD | CIL_0002JD_0002 | CGP | 4:46114746-46172403 |
| CIL_00029T | CIL_00029T_0002 | CGP | 4:46138613-46196311 |
| CIL_00029U | CIL_00029U_0002 | CGP | 4:46155347-46346412 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000375128
|
XPA-001 | protein_coding | Homo_sapiens | 2e-35 | 154 |
|
ENST00000462523
|
XPA-003 | nonsense_mediated_decay | Homo_sapiens | 3e-35 | 154 |
|
ENST00000496104
|
XPA-002 | processed_transcript | Homo_sapiens | 0.00000000002 | 73 |
