C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: family with sequence similarity 188, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130097 Fam188a-003 ENSMUSG00000026767 10090 - 2:12399659-12419441 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLungOvaryENSMUST00000130097
Transcript ID Colon Heart Lung Ovary
ENSMUST00000130097 4.324±0.00 0.879±0.00 3.576±0.00 6.736±2.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088I CIL_00088I_0002 VISTA 2:11765185-12368019
CIL_0002HM CIL_0002HM_0002 CGP 2:12106632-12419469
CIL_0002HH CIL_0002HH_0002 CGP 2:12347263-13003453

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277632 FAM188A-001 protein_coding Homo_sapiens 0 869
ENST00000418767 FAM188A-006 protein_coding Homo_sapiens 5e-36 156
ENST00000436829 FAM188A-005 protein_coding Homo_sapiens 5.99756e-43 178
ENST00000477891 FAM188A-002 processed_transcript Homo_sapiens 0 597

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