C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | family with sequence similarity 188, member A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000418767  |
FAM188A-006 |
ENSG00000148481 |
9606 | - |
10:15788828-15837299  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088I | CIL_00088I_0001 | VISTA | 10:15191068-15798325 |
| CIL_0002HM | CIL_0002HM_0001 | CGP | 10:15513949-15860520 |
| CIL_0002HH | CIL_0002HH_0001 | CGP | 10:15778170-16513745 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000130225
|
Fam188a-015 | retained_intron | Mus_musculus | 0 | 787 |
|
ENSMUST00000144645
|
Fam188a-004 | nonsense_mediated_decay | Mus_musculus | 0 | 761 |
|
ENSMUST00000028105
|
Fam188a-001 | protein_coding | Mus_musculus | 0 | 761 |
|
ENSMUST00000129489
|
Fam188a-002 | nonsense_mediated_decay | Mus_musculus | 0 | 761 |
|
ENSMUST00000155530
|
Fam188a-005 | nonsense_mediated_decay | Mus_musculus | 0 | 761 |
|
ENSMUST00000137082
|
Fam188a-014 | retained_intron | Mus_musculus | 0 | 616 |
|
ENSMUST00000154899
|
Fam188a-006 | protein_coding | Mus_musculus | 0 | 612 |
|
ENSMUST00000124603
|
Fam188a-008 | nonsense_mediated_decay | Mus_musculus | 0 | 424 |
|
ENSMUST00000129348
|
Fam188a-012 | protein_coding | Mus_musculus | 0 | 383 |
|
ENSMUST00000129993
|
Fam188a-007 | processed_transcript | Mus_musculus | 0 | 263 |
|
ENSMUST00000130097
|
Fam188a-003 | retained_intron | Mus_musculus | 5e-36 | 156 |
|
ENSMUST00000153690
|
Fam188a-011 | processed_transcript | Mus_musculus | 6e-25 | 119 |
