C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002HH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148481-ENSG00000165983 CGP 9606 10:15778170-16513745
GeneTranscriptPositionBiotype
ENSG00000148481 (FAM188A)
family with sequence similarity 188, member A 		ENST00000277632 (FAM188A-001) 15778170-15860520 protein_coding
ENST00000378036 (FAM188A-003) 15778170-15818008 protein_coding
ENST00000418767 (FAM188A-006) 15788828-15837299 protein_coding
ENST00000436829 (FAM188A-005) 15796120-15838279 protein_coding
ENST00000476912 (FAM188A-007) 15778854-15782335 processed_transcript
ENST00000477891 (FAM188A-002) 15778170-15860498 processed_transcript
ENSG00000165983 (PTER)
phosphotriesterase related 		ENST00000298942 (PTER-201) 16484335-16513745 protein_coding
ENST00000378000 (PTER-002) 16436984-16513737 protein_coding
ENST00000423462 (PTER-202) 16436943-16513745 protein_coding
ENST00000485788 (PTER-003) 16484691-16486792 processed_transcript
ENST00000535784 (PTER-001) 16436943-16511256 protein_coding
ENSG00000165985 (C1QL3)
complement component 1, q subcomponent-like 3 		ENST00000298943 (C1QL3-001) 16513743-16522005 protein_coding
ENST00000619991 (C1QL3-201) 16514467-16521145 protein_coding
ENSG00000223156 (RNU2-18P)
RNA, U2 small nuclear 18, pseudogene 		ENST00000411224 (RNU2-18P-201) 16476003-16476164 snRNA
ENSG00000252537 (SNORA31)
Small nucleolar RNA SNORA31 		ENST00000516728 (SNORA31.1-214) 16005808-16005923 snoRNA
CIL_0002HH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026767-ENSMUSG00000026730 CGP 10090 2:12347263-13003453
GeneTranscriptPositionBiotype
ENSMUSG00000026730 (Pter)
phosphotriesterase related 		ENSMUST00000028063 (Pter-002) 12924041-13001611 protein_coding
ENSMUST00000114796 (Pter-005) 12924069-13000981 protein_coding
ENSMUST00000134794 (Pter-001) 12924041-13003453 protein_coding
ENSMUST00000150283 (Pter-004) 12924062-12980529 processed_transcript
ENSMUST00000154269 (Pter-003) 12924041-12980404 protein_coding
ENSMUSG00000026767 (Fam188a)
family with sequence similarity 188, member A 		ENSMUST00000028105 (Fam188a-001) 12347265-12419469 protein_coding
ENSMUST00000124515 (Fam188a-009) 12401059-12419391 protein_coding
ENSMUST00000124603 (Fam188a-008) 12355307-12419443 nonsense_mediated_decay
ENSMUST00000129348 (Fam188a-012) 12386647-12410065 protein_coding
ENSMUST00000129489 (Fam188a-002) 12347263-12419444 nonsense_mediated_decay
ENSMUST00000129993 (Fam188a-007) 12386607-12419448 processed_transcript
ENSMUST00000130097 (Fam188a-003) 12399659-12419441 retained_intron
ENSMUST00000130225 (Fam188a-015) 12356785-12396248 retained_intron
ENSMUST00000135397 (Fam188a-016) 12347632-12356911 nonsense_mediated_decay
ENSMUST00000137082 (Fam188a-014) 12355332-12397885 retained_intron
ENSMUST00000144645 (Fam188a-004) 12347920-12419452 nonsense_mediated_decay
ENSMUST00000151529 (Fam188a-010) 12401070-12419249 nonsense_mediated_decay
ENSMUST00000153690 (Fam188a-011) 12400044-12410204 processed_transcript
ENSMUST00000154899 (Fam188a-006) 12348062-12419462 protein_coding
ENSMUST00000154952 (Fam188a-013) 12403998-12404729 processed_transcript
ENSMUST00000155530 (Fam188a-005) 12347266-12419435 nonsense_mediated_decay
ENSMUSG00000083547 (Gm13321)
predicted gene 13321 		ENSMUST00000117101 (Gm13321-001) 12421625-12422023 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HH_0001ENSG00000148481ENST00000277632ENST00000378036ENST00000418767ENST00000436829ENST00000476912ENST00000477891ENSG00000165983ENST00000298942ENST00000378000ENST00000423462ENST00000485788ENST00000535784ENSG00000165985ENST00000298943ENST00000619991ENSG00000223156ENST00000411224ENSG00000252537ENST00000516728CIL_0002HH_0002ENSMUSG00000026730ENSMUST00000028063ENSMUST00000114796ENSMUST00000134794ENSMUST00000150283ENSMUST00000154269ENSMUSG00000026767ENSMUST00000028105ENSMUST00000124515ENSMUST00000124603ENSMUST00000129348ENSMUST00000129489ENSMUST00000129993ENSMUST00000130097ENSMUST00000130225ENSMUST00000135397ENSMUST00000137082ENSMUST00000144645ENSMUST00000151529ENSMUST00000153690ENSMUST00000154899ENSMUST00000154952ENSMUST00000155530ENSMUSG00000083547ENSMUST00000117101
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HH_0001ENSG00000148481ENST00000277632ENST00000436829ENST00000476912ENST00000477891ENSG00000165983ENST00000298942ENST00000378000ENST00000423462ENST00000535784ENSG00000165985ENST00000298943ENSG00000223156ENST00000411224ENSG00000252537ENST00000516728CIL_0002HH_0002ENSMUSG00000026730ENSMUST00000028063ENSMUST00000114796ENSMUST00000134794ENSMUST00000150283ENSMUST00000154269ENSMUSG00000026767ENSMUST00000028105ENSMUST00000124515ENSMUST00000124603ENSMUST00000129348ENSMUST00000129489ENSMUST00000129993ENSMUST00000130097ENSMUST00000130225ENSMUST00000135397ENSMUST00000144645ENSMUST00000153690ENSMUST00000155530ENSMUSG00000083547ENSMUST00000117101
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148481 ENST00000277632 4.306±0.00 3.785±0.00 N/A 9.048±3.87 4.614±0.00 1.829±0.00 1.906±0.00 5.224±3.07 2.029±0.00 0.536±0.00 N/A 4.991±0.46 5.650±1.03 7.625±0.71
ENST00000378036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.665±0.00 5.174±0.00 8.685±0.00
ENST00000476912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.517±0.00 N/A N/A N/A
ENST00000477891 N/A 1.301±0.00 N/A 1.356±0.00 1.032±0.00 2.151±0.30 1.088±0.07 N/A 1.298±0.63 2.801±0.00 0.645±0.28 1.042±0.15 1.090±0.00 1.715±0.00
ENSG00000165983 ENST00000298942 N/A 1.191±0.00 N/A N/A N/A 0.673±0.30 0.523±0.00 N/A 0.413±0.00 N/A 1.601±0.00 0.353±0.00 0.360±0.12 N/A
ENST00000378000 0.820±0.00 N/A 5.472±0.00 N/A 1.930±0.35 0.565±0.00 0.708±0.42 0.986±0.00 1.344±0.63 1.251±0.00 N/A 0.921±0.42 0.929±0.16 0.315±0.00
ENST00000423462 1.294±0.00 1.462±0.00 N/A N/A 0.831±0.00 1.069±0.00 1.092±0.00 N/A 0.597±0.06 N/A 0.733±0.00 1.869±0.00 0.871±0.39 0.292±0.06
ENST00000485788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535784 2.170±0.00 N/A N/A N/A N/A 1.373±0.00 1.151±0.00 2.106±0.00 1.091±0.00 1.288±0.00 2.484±0.00 6.177±0.00 2.176±0.00 0.673±0.00
ENSG00000165985 ENST00000298943 N/A N/A N/A 16.529±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223156 ENST00000411224 N/A 0.550±0.00 N/A 0.069±0.00 N/A N/A 0.134±0.00 N/A N/A 0.051±0.00 0.063±0.00 N/A N/A N/A
ENSG00000252537 ENST00000516728 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.123±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026730 ENSMUST00000028063 1.404±0.71 0.289±0.15 1.203±0.18 N/A 0.685±0.28 0.729±0.12 0.721±0.32 36.194±5.52 10.494±3.13 0.672±0.20 2.436±0.40 1.093±0.63 0.954±0.51 0.150±0.12
ENSMUST00000114796 3.504±0.72 1.586±0.43 N/A N/A 1.932±0.98 1.263±0.40 1.225±0.58 44.113±7.56 10.752±2.77 0.834±0.19 2.148±0.40 1.587±0.70 1.199±0.55 0.272±0.01
ENSMUST00000134794 0.612±0.14 1.016±0.11 1.164±0.00 0.308±0.00 0.535±0.15 0.340±0.05 0.236±0.00 9.668±0.44 2.596±1.13 0.327±0.08 N/A 0.307±0.10 0.296±0.17 0.055±0.02
ENSMUST00000150283 N/A N/A N/A N/A N/A 2.294±0.00 N/A N/A N/A N/A N/A 1.677±0.37 N/A N/A
ENSMUST00000154269 2.204±0.15 1.093±0.48 2.256±0.69 N/A 1.278±0.03 1.519±0.41 1.086±0.25 70.206±0.00 12.597±5.07 0.926±0.36 3.095±0.46 1.194±0.57 0.965±0.36 0.123±0.06
ENSMUSG00000026767 ENSMUST00000028105 4.079±0.37 8.769±1.08 6.841±1.22 6.970±4.15 3.143±0.73 4.129±0.83 1.667±0.05 5.829±1.03 5.965±2.15 5.838±1.27 1.185±0.29 2.992±0.41 4.976±3.28 3.830±1.73
ENSMUST00000124515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.866±0.00 N/A
ENSMUST00000124603 N/A N/A N/A N/A N/A 3.262±0.00 N/A N/A N/A N/A N/A 4.803±0.00 N/A N/A
ENSMUST00000129348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.748±0.00 17.312±1.27 6.094±0.00
ENSMUST00000129489 N/A N/A N/A 1.035±0.00 N/A N/A N/A N/A N/A N/A 1.003±0.00 2.087±0.68 N/A N/A
ENSMUST00000129993 29.284±2.69 65.281±23.99 N/A 39.873±0.00 33.552±4.67 40.410±11.90 8.072±1.86 35.152±11.60 22.039±3.19 42.524±3.86 N/A 15.902±7.97 N/A 22.163±1.28
ENSMUST00000130097 N/A N/A N/A N/A N/A 4.324±0.00 0.879±0.00 N/A N/A 3.576±0.00 N/A 6.736±2.65 N/A N/A
ENSMUST00000130225 N/A N/A N/A 14.987±0.00 N/A N/A N/A N/A N/A N/A N/A 24.236±0.00 19.196±2.04 7.409±0.00
ENSMUST00000135397 N/A N/A N/A N/A 2.263±0.00 N/A N/A N/A N/A N/A 1.402±0.00 N/A N/A N/A
ENSMUST00000137082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144645 2.490±0.33 N/A N/A N/A 4.975±0.00 5.322±0.64 1.021±0.24 4.349±0.90 3.604±0.42 4.650±0.64 N/A 4.167±0.85 N/A 2.422±0.00
ENSMUST00000151529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.514±0.00 2.885±0.00
ENSMUST00000154899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155530 N/A N/A N/A 1.025±0.00 3.259±2.11 4.833±0.00 0.917±0.21 N/A N/A N/A 0.910±0.29 2.679±0.00 N/A N/A
ENSMUSG00000083547 ENSMUST00000117101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.570±0.09 0.329±0.11 0.132±0.00

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