C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130354 Dennd5a-008 ENSMUSG00000035901 10090 - 7:109893780-109896699 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000130354
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000130354 38.724±9.81 16.113±1.54 9.886±1.62 14.350±0.00 9.592±1.66 4.945±0.85 26.783±0.00 31.637±9.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000499 CIL_000499_0002 CGP 7:109798676-109960470
CIL_0009CP CIL_0009CP_0002 VISTA 7:109862809-110466321
CIL_0001HO CIL_0001HO_0003 CGP 7:109893780-109986929

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328194 DENND5A-001 protein_coding Homo_sapiens 0 1018
ENST00000527700 DENND5A-004 retained_intron Homo_sapiens 0 584
ENST00000528725 DENND5A-016 protein_coding Homo_sapiens 0 586
ENST00000529977 DENND5A-005 retained_intron Homo_sapiens 0 1013
ENST00000530044 DENND5A-003 protein_coding Homo_sapiens 0 446
ENST00000533737 DENND5A-015 protein_coding Homo_sapiens 0 364

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