C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fras1 related extracellular matrix protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131102 Frem1-003 ENSMUSG00000059049 10090 - 4:82992935-83052339 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverMuscleENSMUST00000131102
Transcript ID Adipose Colon Liver Muscle
ENSMUST00000131102 0.014±0.00 0.162±0.00 0.026±0.00 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000943 CIL_000943_0002 VISTA 4:82615373-83218271
CIL_000149 CIL_000149_0002 CGP 4:82881751-83052339
CIL_00014A CIL_00014A_0002 CGP 4:82897920-83324255

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380875 FREM1-005 nonsense_mediated_decay Homo_sapiens 0 2091
ENST00000380880 FREM1-001 protein_coding Homo_sapiens 0 2109
ENST00000422223 FREM1-201 protein_coding Homo_sapiens 0 2091

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