C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000149_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147869-ENSG00000164946 CGP 9606 9:14719724-14910995
GeneTranscriptPositionBiotype
ENSG00000147869 (CER1)
cerberus 1, DAN family BMP antagonist 		ENST00000380911 (CER1-001) 14719724-14722717 protein_coding
ENSG00000164946 (FREM1)
FRAS1 related extracellular matrix 1 		ENST00000380875 (FREM1-005) 14737200-14910995 nonsense_mediated_decay
ENST00000380880 (FREM1-001) 14737396-14910430 protein_coding
ENST00000380894 (FREM1-002) 14737152-14779533 protein_coding
ENST00000422223 (FREM1-201) 14734666-14910995 protein_coding
ENST00000427623 (FREM1-006) 14737366-14774161 nonsense_mediated_decay
ENST00000466679 (FREM1-007) 14775935-14792801 processed_transcript
ENST00000485068 (FREM1-009) 14775823-14784634 processed_transcript
ENST00000486223 (FREM1-010) 14751705-14775905 processed_transcript
ENST00000497634 (FREM1-004) 14784272-14792884 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_000149_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038192-ENSMUSG00000059049 CGP 10090 4:82881751-83052339
GeneTranscriptPositionBiotype
ENSMUSG00000038192 (Cer1)
cerberus 1 homolog (Xenopus laevis) 		ENSMUST00000048430 (Cer1-001) 82881751-82885148 protein_coding
ENSMUSG00000059049 (Frem1)
Fras1 related extracellular matrix protein 1 		ENSMUST00000071708 (Frem1-201) 82897927-83021102 protein_coding
ENSMUST00000107230 (Frem1-001) 82897927-83052339 protein_coding
ENSMUST00000127886 (Frem1-002) 82938426-82970703 protein_coding
ENSMUST00000130889 (Frem1-005) 82915633-82924792 retained_intron
ENSMUST00000131102 (Frem1-003) 82992935-83052339 processed_transcript
ENSMUST00000133610 (Frem1-006) 82900564-82914434 processed_transcript
ENSMUST00000141841 (Frem1-004) 82936109-82940882 retained_intron
ENSMUST00000170248 (Frem1-202) 82897920-83052167 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000149_0001ENSG00000147869ENST00000380911ENSG00000164946ENST00000380875ENST00000380880ENST00000380894ENST00000422223ENST00000427623ENST00000466679ENST00000485068ENST00000486223ENST00000497634CIL_000149_0002ENSMUSG00000038192ENSMUST00000048430ENSMUSG00000059049ENSMUST00000071708ENSMUST00000107230ENSMUST00000127886ENSMUST00000130889ENSMUST00000131102ENSMUST00000133610ENSMUST00000141841ENSMUST00000170248
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000149_0001ENSG00000147869ENST00000380911ENSG00000164946ENST00000380875ENST00000380880ENST00000380894ENST00000422223ENST00000427623ENST00000466679CIL_000149_0002ENSMUSG00000038192ENSMUST00000048430ENSMUSG00000059049ENSMUST00000071708ENSMUST00000107230ENSMUST00000127886ENSMUST00000131102ENSMUST00000133610ENSMUST00000141841ENSMUST00000170248
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147869 ENST00000380911 N/A 0.062±0.00 N/A 0.013±0.00 0.175±0.00 N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A 0.054±0.00
ENSG00000164946 ENST00000380875 N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 0.008±0.00 0.223±0.00 0.337±0.23 N/A 0.155±0.05 N/A
ENST00000380880 0.107±0.00 0.135±0.00 0.696±0.00 0.115±0.00 1.492±0.87 0.413±0.00 0.187±0.05 1.694±0.00 N/A N/A N/A 0.249±0.11 0.384±0.12 0.610±0.00
ENST00000380894 N/A N/A N/A 0.319±0.00 1.715±0.00 N/A 0.264±0.03 2.378±0.00 N/A 1.030±0.00 0.434±0.00 0.952±0.45 0.736±0.71 2.035±0.94
ENST00000422223 N/A N/A 0.810±0.00 N/A 0.323±0.00 N/A 0.099±0.00 N/A 0.357±0.00 0.073±0.00 N/A N/A 0.136±0.00 0.171±0.00
ENST00000427623 0.182±0.00 N/A N/A N/A N/A N/A 0.361±0.00 N/A 0.059±0.00 N/A N/A N/A N/A 1.102±0.00
ENST00000466679 N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00 1.608±0.00 N/A N/A 0.521±0.00 N/A
ENST00000485068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038192 ENSMUST00000048430 N/A N/A N/A 0.033±0.03 0.019±0.00 N/A N/A 0.018±0.00 0.005±0.00 0.042±0.02 0.025±0.00 0.022±0.01 0.111±0.06 0.027±0.02
ENSMUSG00000059049 ENSMUST00000071708 0.073±0.00 0.081±0.05 0.250±0.00 0.302±0.06 N/A 0.095±0.01 0.039±0.00 N/A 0.034±0.02 0.288±0.00 0.033±0.02 1.195±0.09 0.212±0.11 N/A
ENSMUST00000107230 0.157±0.00 N/A N/A 0.513±0.01 0.928±0.00 0.227±0.00 N/A 0.550±0.00 0.237±0.17 0.582±0.00 N/A 1.584±1.01 0.448±0.35 N/A
ENSMUST00000127886 N/A 0.085±0.04 N/A N/A N/A 0.149±0.10 0.028±0.01 N/A N/A N/A N/A 1.765±0.14 N/A N/A
ENSMUST00000130889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131102 0.014±0.00 N/A N/A N/A N/A 0.162±0.00 N/A N/A 0.026±0.00 N/A 0.033±0.00 N/A N/A N/A
ENSMUST00000133610 N/A 0.385±0.00 N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A
ENSMUST00000141841 N/A 0.210±0.10 N/A N/A N/A N/A N/A N/A 0.165±0.06 N/A N/A N/A N/A N/A
ENSMUST00000170248 0.153±0.11 0.117±0.02 0.597±0.03 0.637±0.00 1.484±0.68 0.188±0.00 N/A 1.054±0.12 0.135±0.05 0.586±0.09 0.032±0.00 2.302±0.99 0.438±0.33 N/A

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