C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | spectrin repeat containing, nuclear envelope 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000131480  |
Syne2-014 |
ENSMUSG00000063450 |
10090 | + |
12:76072016-76094436  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004WO | CIL_0004WO_0002 | CGP | 12:75714248-76110926 |
| CIL_00010O | CIL_00010O_0002 | CGP | 12:75818134-76177259 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005635 | IDA | nuclear envelope |
| GO:0006998 | IMP | nuclear envelope organization |
| GO:0007163 | IMP | establishment or maintenance of cell polarity |
| GO:0010761 | IMP | fibroblast migration |
| GO:0030016 | IDA | myofibril |
| GO:0030018 | IDA | Z disc |
| GO:0031965 | IDA | nuclear membrane |
| GO:0034504 | IMP | protein localization to nucleus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000344113
|
SYNE2-001 | protein_coding | Homo_sapiens | 0 | 891 |
|
ENST00000357395
|
SYNE2-201 | protein_coding | Homo_sapiens | 0 | 448 |
|
ENST00000358025
|
SYNE2-202 | protein_coding | Homo_sapiens | 0 | 891 |
|
ENST00000394768
|
SYNE2-014 | protein_coding | Homo_sapiens | 0 | 891 |
|
ENST00000553289
|
SYNE2-013 | nonsense_mediated_decay | Homo_sapiens | 0 | 451 |
|
ENST00000553801
|
SYNE2-016 | processed_transcript | Homo_sapiens | 0 | 217 |
|
ENST00000554584
|
SYNE2-002 | protein_coding | Homo_sapiens | 0 | 448 |
|
ENST00000555002
|
SYNE2-011 | protein_coding | Homo_sapiens | 0 | 891 |
|
ENST00000555022
|
SYNE2-009 | protein_coding | Homo_sapiens | 0 | 219 |
|
ENST00000555241
|
SYNE2-018 | processed_transcript | Homo_sapiens | 0 | 388 |
|
ENST00000555612
|
SYNE2-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 675 |
|
ENST00000556906
|
SYNE2-017 | protein_coding | Homo_sapiens | 0 | 390 |
