Transcript ID | Bladder | Colon | Kidney | Liver | Lung | Muscle | Ovary |
---|---|---|---|---|---|---|---|
ENST00000344113 | 8.053±0.00 | 6.360±0.00 | 1.859±0.00 | 2.538±0.00 | 4.082±0.00 | 0.670±0.00 | 4.380±0.00 |
Transcript Info |
||||||
Description: | spectrin repeat containing, nuclear envelope 2 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000344113 | SYNE2-001 | ENSG00000054654 | 9606 | + | 14:63852983-64226433 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0004WO | CIL_0004WO_0001 | CGP | 14:63684214-64226433 |
CIL_00010O | CIL_00010O_0001 | CGP | 14:63852983-64338112 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0003779 | IEA:ISS | actin binding |
GO:0005515 | IPI:IEA | protein binding |
GO:0005634 | IDA | nucleus |
GO:0005635 | IDA | nuclear envelope |
GO:0005737 | IDA | cytoplasm |
GO:0005739 | IDA | mitochondrion |
GO:0005925 | IDA | focal adhesion |
GO:0007097 | IMP | nuclear migration |
GO:0016021 | IEA | integral component of membrane |
GO:0016235 | IDA | aggresome |
GO:0016529 | IDA | sarcoplasmic reticulum |
GO:0030018 | IDA | Z disc |
GO:0030335 | ISS | positive regulation of cell migration |
GO:0031022 | ISS | nuclear migration along microfilament |
GO:0031258 | IDA | lamellipodium membrane |
GO:0031527 | IDA | filopodium membrane |
GO:0031965 | IDA | nuclear membrane |
GO:0031981 | IDA | nuclear lumen |
GO:0034993 | IDA | SUN-KASH complex |
GO:0045111 | IDA | intermediate filament cytoskeleton |
GO:0051642 | IMP | centrosome localization |
GO:0090286 | IDA | cytoskeletal anchoring at nuclear membrane |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000143031 | Syne2-001 | protein_coding | Mus_musculus | 0 | 10940 |
ENSMUST00000044217 | Syne2-201 | protein_coding | Mus_musculus | 0 | 10920 |
ENSMUST00000085280 | Syne2-006 | protein_coding | Mus_musculus | 0 | 4401 |
ENSMUST00000139204 | Syne2-007 | protein_coding | Mus_musculus | 0 | 4015 |
ENSMUST00000132161 | Syne2-008 | nonsense_mediated_decay | Mus_musculus | 0 | 1578 |
ENSMUST00000150317 | Syne2-003 | protein_coding | Mus_musculus | 0 | 1131 |
ENSMUST00000157033 | Syne2-004 | retained_intron | Mus_musculus | 0 | 1064 |
ENSMUST00000131480 | Syne2-014 | protein_coding | Mus_musculus | 0 | 891 |
ENSMUST00000133623 | Syne2-002 | retained_intron | Mus_musculus | 0 | 889 |
ENSMUST00000126903 | Syne2-013 | nonsense_mediated_decay | Mus_musculus | 0 | 743 |
ENSMUST00000154509 | Syne2-012 | protein_coding | Mus_musculus | 0 | 503 |
ENSMUST00000142864 | Syne2-009 | protein_coding | Mus_musculus | 0 | 377 |
ENSMUST00000124685 | Syne2-005 | retained_intron | Mus_musculus | 4e-29 | 137 |