C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00010O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000054654-ENSG00000140009 CGP 9606 14:63852983-64338112
GeneTranscriptPositionBiotype
ENSG00000214770 (RP11-544I20.2)
 ENST00000359491 (RP11-544I20.2-001) 64335835-64338599 antisense
ENST00000555861 (RP11-544I20.2-002) 64329431-64336569 antisense
CIL_00010O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063450-ENSMUSG00000021055 CGP 10090 12:75818134-76177259
GeneTranscriptPositionBiotype
ENSMUSG00000021055 (Esr2)
estrogen receptor 2 (beta) 		ENSMUST00000076634 (Esr2-201) 76120439-76177259 protein_coding
ENSMUST00000101291 (Esr2-002) 76120419-76177259 protein_coding
ENSMUST00000110421 (Esr2-001) 76120419-76167715 protein_coding
ENSMUST00000133564 (Esr2-003) 76120419-76177259 nonsense_mediated_decay
ENSMUSG00000046580 (Gm7862)
predicted gene 7862 		ENSMUST00000121461 (Gm7862-001) 76152336-76152627 processed_pseudogene
ENSMUSG00000063450 (Syne2)
spectrin repeat containing, nuclear envelope 2 		ENSMUST00000044217 (Syne2-201) 75818318-76110900 protein_coding
ENSMUST00000085280 (Syne2-006) 76031614-76110920 protein_coding
ENSMUST00000124685 (Syne2-005) 75909218-75913887 retained_intron
ENSMUST00000126903 (Syne2-013) 76081939-76097981 nonsense_mediated_decay
ENSMUST00000131480 (Syne2-014) 76072016-76094436 protein_coding
ENSMUST00000132161 (Syne2-008) 76087760-76110926 nonsense_mediated_decay
ENSMUST00000133623 (Syne2-002) 75818323-75891049 retained_intron
ENSMUST00000139204 (Syne2-007) 76048578-76110900 protein_coding
ENSMUST00000142864 (Syne2-009) 75818134-75880506 protein_coding
ENSMUST00000143031 (Syne2-001) 75818318-76110926 protein_coding
ENSMUST00000148324 (Syne2-010) 75852730-75880328 protein_coding
ENSMUST00000148825 (Syne2-016) 76022300-76027815 protein_coding
ENSMUST00000150317 (Syne2-003) 75818329-75908877 protein_coding
ENSMUST00000151286 (Syne2-011) 76100901-76105992 retained_intron
ENSMUST00000154509 (Syne2-012) 76081656-76095046 protein_coding
ENSMUST00000154762 (Syne2-015) 76059674-76066516 retained_intron
ENSMUST00000157033 (Syne2-004) 75818350-75905903 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010O_0001ENSG00000214770ENST00000359491ENST00000555861CIL_00010O_0002ENSMUSG00000021055ENSMUST00000076634ENSMUST00000101291ENSMUST00000110421ENSMUST00000133564ENSMUSG00000046580ENSMUST00000121461ENSMUSG00000063450ENSMUST00000044217ENSMUST00000085280ENSMUST00000124685ENSMUST00000126903ENSMUST00000131480ENSMUST00000132161ENSMUST00000133623ENSMUST00000139204ENSMUST00000142864ENSMUST00000143031ENSMUST00000148324ENSMUST00000148825ENSMUST00000150317ENSMUST00000151286ENSMUST00000154509ENSMUST00000154762ENSMUST00000157033
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00010O_0001ENSG00000214770ENST00000359491ENST00000555861CIL_00010O_0002ENSMUSG00000021055ENSMUST00000076634ENSMUST00000101291ENSMUST00000110421ENSMUST00000133564ENSMUSG00000046580ENSMUST00000121461ENSMUSG00000063450ENSMUST00000044217ENSMUST00000085280ENSMUST00000126903ENSMUST00000132161ENSMUST00000139204ENSMUST00000143031
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000214770 ENST00000359491 N/A 0.175±0.00 N/A 0.212±0.06 N/A 0.105±0.03 N/A N/A 0.075±0.00 0.103±0.00 N/A N/A 0.018±0.00 2.088±1.03
ENST00000555861 N/A 0.331±0.00 N/A 0.166±0.00 N/A 0.128±0.00 0.080±0.00 N/A 0.052±0.00 0.205±0.00 0.097±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021055 ENSMUST00000076634 N/A N/A 0.152±0.00 0.022±0.00 N/A 0.332±0.16 N/A N/A N/A N/A N/A 11.794±4.82 0.019±0.00 0.168±0.01
ENSMUST00000101291 0.017±0.00 N/A 0.030±0.00 N/A N/A 0.203±0.00 N/A N/A N/A 0.841±0.38 N/A 10.517±3.56 0.014±0.00 N/A
ENSMUST00000110421 0.056±0.03 N/A 0.054±0.00 0.020±0.00 0.034±0.02 0.248±0.09 0.031±0.01 0.103±0.05 0.015±0.01 0.403±0.09 0.057±0.01 11.634±4.99 0.029±0.03 0.055±0.04
ENSMUST00000133564 N/A N/A N/A 0.083±0.00 0.029±0.00 0.251±0.08 0.081±0.00 N/A 0.011±0.00 N/A N/A 7.545±4.74 N/A N/A
ENSMUSG00000046580 ENSMUST00000121461 0.256±0.00 N/A 4.710±2.44 1.491±1.20 0.310±0.00 0.310±0.00 N/A 0.258±0.01 2.038±2.29 0.441±0.13 0.606±0.21 5.559±6.70 8.956±6.33 0.263±0.00
ENSMUSG00000063450 ENSMUST00000044217 N/A N/A N/A N/A 0.634±0.00 N/A N/A N/A 0.191±0.01 N/A 0.214±0.02 N/A N/A N/A
ENSMUST00000085280 1.522±0.24 N/A 4.408±0.03 1.972±1.00 N/A N/A 0.916±0.25 N/A 0.212±0.06 N/A 0.897±0.15 50.616±26.35 2.896±2.06 7.049±0.00
ENSMUST00000124685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126903 N/A N/A N/A 9.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 23.157±6.22 N/A
ENSMUST00000131480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132161 10.418±0.57 8.070±0.53 8.515±1.21 8.587±3.97 7.092±2.18 14.427±1.16 5.624±0.41 10.324±1.28 1.261±0.49 23.220±1.98 1.409±0.46 48.999±6.72 3.383±0.87 4.316±0.60
ENSMUST00000133623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139204 3.780±0.89 2.811±0.66 5.055±0.85 5.386±1.71 2.499±0.86 8.411±1.14 1.190±0.17 8.604±2.07 0.882±0.44 8.242±0.99 N/A 28.676±6.66 1.524±0.10 5.287±0.43
ENSMUST00000142864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143031 1.344±0.46 0.574±0.09 1.153±0.24 0.869±0.49 0.696±0.12 1.304±0.19 0.713±0.09 2.189±0.38 0.228±0.11 2.512±0.31 0.282±0.06 8.438±3.58 0.799±0.33 0.886±0.22
ENSMUST00000148324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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