C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132804 Ubxn6-003 ENSMUSG00000019578 10090 - 17:56068250-56072232 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLungOvaryPlacentaENSMUST00000132804
Transcript ID Bladder Breast Lung Ovary Placenta
ENSMUST00000132804 3.254±0.00 4.220±0.90 3.064±0.00 4.568±0.16 2.295±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036Q CIL_00036Q_0002 CGP 17:56016753-56068026
CIL_0001RW CIL_0001RW_0002 CGP 17:56040416-56075028
CIL_0002Z9 CIL_0002Z9_0002 CGP 17:56067045-56100596

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261890 RAB11A-001 protein_coding Homo_sapiens 0.00002 57
ENST00000394807 ZBTB3-001 protein_coding Homo_sapiens 0.000004 58
ENST00000401725 AC019109.1-001 processed_pseudogene Homo_sapiens 0.000000004 68
ENST00000523988 SLC25A30-004 retained_intron Homo_sapiens 0.00000005 66
ENST00000578223 PER1-011 retained_intron Homo_sapiens 0.0000000001 71
ENST00000601372 ZNF558-001 protein_coding Homo_sapiens 0.00001 58

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