| Transcript ID | Breast | Ovary |
|---|---|---|
| ENST00000562258 | 0.886±0.00 | 0.920±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | vacuolar protein sorting 39 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000562258  |
VPS39-003 |
ENSG00000166887 |
9606 | - |
15:42158716-42166219  |
retained_intron |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005PN | CIL_0005PN_0001 | CGP | 15:42139034-42208316 |
| CIL_0005PM | CIL_0005PM_0001 | CGP | 15:42158701-42273663 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000129857
|
Vps39-003 | processed_transcript | Mus_musculus | 0 | 1149 |
|
ENSMUST00000028752
|
Vps39-002 | protein_coding | Mus_musculus | 0 | 1149 |
|
ENSMUST00000102501
|
Vps39-001 | protein_coding | Mus_musculus | 0 | 1149 |
|
ENSMUST00000145193
|
Vps39-005 | retained_intron | Mus_musculus | 0 | 387 |
|
ENSMUST00000147085
|
Vps39-004 | retained_intron | Mus_musculus | 0 | 370 |
|
ENSMUST00000133260
|
Vps39-010 | retained_intron | Mus_musculus | 0 | 248 |
