C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyl-CpG binding domain protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133830 Mbd4-004 ENSMUSG00000030322 10090 - 6:115841199-115848705 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000133830
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000133830 0.395±0.00 0.371±0.10 1.001±0.00 0.728±0.21 0.440±0.00 0.107±0.01 0.334±0.09 0.156±0.02 0.477±0.13 0.137±0.00 0.598±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030X CIL_00030X_0002 CGP 6:115810729-115853371
CIL_00030Y CIL_00030Y_0002 CGP 6:115840697-115926699

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249910 MBD4-001 protein_coding Homo_sapiens 0 614
ENST00000393278 MBD4-201 protein_coding Homo_sapiens 0 614
ENST00000429544 MBD4-003 protein_coding Homo_sapiens 0 614
ENST00000503197 MBD4-002 protein_coding Homo_sapiens 0 418
ENST00000507208 MBD4-009 protein_coding Homo_sapiens 0 496
ENST00000509828 MBD4-005 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000515266 MBD4-007 retained_intron Homo_sapiens 0 387

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