C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136937 Bcas2-003 ENSMUSG00000005687 10090 + 3:103171703-103178825 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000136937
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000136937 1.424±0.55 2.680±0.57 3.331±0.40 1.323±0.50 1.459±0.33 0.752±0.02 1.100±0.14 5.466±2.96 1.515±0.15 0.731±0.00 2.292±0.56 2.584±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RY CIL_0003RY_0002 CGP 3:103102604-103179166
CIL_0006WV CIL_0006WV_0002 CGP 3:103171655-103358768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369541 BCAS2-001 protein_coding Homo_sapiens 0 536
ENST00000416374 BCAS2P3-001 processed_pseudogene Homo_sapiens 0.0000000005 69
ENST00000425064 BCAS2P2-001 processed_pseudogene Homo_sapiens 0 425
ENST00000485021 BCAS2-002 processed_transcript Homo_sapiens 0 206

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