C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137423 Rps8-005 ENSMUSG00000047675 10090 - 4:117153834-117154497 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000137423
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000137423 76.807±0.00 410.235±75.32 330.960±161.05 14.312±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0002 VISTA 4:117090982-117692314

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372209 RPS8-003 protein_coding Homo_sapiens 0 298
ENST00000372214 RP11-571F15.3-001 processed_pseudogene Homo_sapiens 0 259
ENST00000396651 RPS8-001 protein_coding Homo_sapiens 0 298
ENST00000415328 RP11-229A12.2-001 processed_pseudogene Homo_sapiens 0 259
ENST00000426177 RPS8P6-001 processed_pseudogene Homo_sapiens 8.00001e-42 174
ENST00000460876 RP11-2F9.3-001 processed_pseudogene Homo_sapiens 0 272
ENST00000464658 RPS8-006 processed_transcript Homo_sapiens 0 298
ENST00000474582 RPS8-008 processed_transcript Homo_sapiens 0 305
ENST00000481419 AC006539.2-001 processed_pseudogene Homo_sapiens 2e-27 126
ENST00000484005 RP11-252I14.1-001 processed_pseudogene Homo_sapiens 4e-35 152
ENST00000484599 RPS8-007 processed_transcript Homo_sapiens 0 206
ENST00000485390 RPS8-004 processed_transcript Homo_sapiens 0 298
ENST00000492328 ZNF90-004 processed_transcript Homo_sapiens 2e-27 126

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