C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin, beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138006 Arrb2-012 ENSMUSG00000060216 10090 + 11:70436699-70440233 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartLiverLungOvaryENSMUST00000138006
Transcript ID Adipose Adrenal Brain Colon Heart Liver Lung Ovary
ENSMUST00000138006 5.083±1.45 3.251±0.19 5.609±0.12 2.423±0.42 1.452±0.41 0.873±0.00 6.416±0.76 2.497±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PS CIL_0001PS_0002 CGP 11:70392883-70440828
CIL_000106 CIL_000106_0002 CGP 11:70432635-70453727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269260 ARRB2-002 protein_coding Homo_sapiens 0 647
ENST00000346341 ARRB2-001 protein_coding Homo_sapiens 0 494
ENST00000381488 ARRB2-009 protein_coding Homo_sapiens 0 647
ENST00000412477 ARRB2-006 protein_coding Homo_sapiens 0 647
ENST00000571206 ARRB2-008 protein_coding Homo_sapiens 0 647
ENST00000571428 ARRB2-020 protein_coding Homo_sapiens 0 257
ENST00000572457 ARRB2-003 protein_coding Homo_sapiens 0 647
ENST00000573886 ARRB2-018 retained_intron Homo_sapiens 3e-36 156
ENST00000574502 ARRB2-010 nonsense_mediated_decay Homo_sapiens 3e-36 156
ENST00000574954 ARRB2-004 protein_coding Homo_sapiens 0 647
ENST00000575877 ARRB2-007 protein_coding Homo_sapiens 0 387
ENST00000576235 ARRB2-021 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000577054 ARRB2-019 retained_intron Homo_sapiens 3e-36 156

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