C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin, beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572457 ARRB2-003 ENSG00000141480 9606 + 17:4710643-4721482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000572457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000572457 16.858±0.00 29.989±0.00 0.797±0.00 14.514±11.10 7.874±5.67 17.449±0.00 9.113±0.00 10.424±0.00 5.759±4.60 42.437±0.00 6.010±0.00 4.778±0.00 19.894±2.35 8.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PS CIL_0001PS_0001 CGP 17:4671385-4721499
CIL_000106 CIL_000106_0001 CGP 17:4710489-4733610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102564 Arrb2-007 protein_coding Mus_musculus 0 1408
ENSMUST00000102563 Arrb2-001 protein_coding Mus_musculus 0 1404
ENSMUST00000079056 Arrb2-005 protein_coding Mus_musculus 0 1225
ENSMUST00000108568 Arrb2-013 protein_coding Mus_musculus 0 1225
ENSMUST00000084954 Arrb2-006 protein_coding Mus_musculus 0 1158
ENSMUST00000128748 Arrb2-011 nonsense_mediated_decay Mus_musculus 0 950
ENSMUST00000143232 Arrb2-002 retained_intron Mus_musculus 0 728
ENSMUST00000138006 Arrb2-012 retained_intron Mus_musculus 0 647
ENSMUST00000144454 Arrb2-003 retained_intron Mus_musculus 0 531
ENSMUST00000125441 Arrb2-004 retained_intron Mus_musculus 0 363

Loading