C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin, beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571428 ARRB2-020 ENSG00000141480 9606 + 17:4710697-4719418 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLiverOvaryPlacentaENST00000571428
Transcript ID Bladder Heart Liver Ovary Placenta
ENST00000571428 2.124±0.00 0.431±0.00 0.850±0.00 12.320±0.00 10.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PS CIL_0001PS_0001 CGP 17:4671385-4721499
CIL_000106 CIL_000106_0001 CGP 17:4710489-4733610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084954 Arrb2-006 protein_coding Mus_musculus 0 1026
ENSMUST00000102563 Arrb2-001 protein_coding Mus_musculus 0 929
ENSMUST00000102564 Arrb2-007 protein_coding Mus_musculus 0 929
ENSMUST00000079056 Arrb2-005 protein_coding Mus_musculus 0 929
ENSMUST00000108568 Arrb2-013 protein_coding Mus_musculus 0 929
ENSMUST00000128748 Arrb2-011 nonsense_mediated_decay Mus_musculus 0 885
ENSMUST00000143232 Arrb2-002 retained_intron Mus_musculus 0 595
ENSMUST00000125441 Arrb2-004 retained_intron Mus_musculus 0 363
ENSMUST00000138006 Arrb2-012 retained_intron Mus_musculus 0 257
ENSMUST00000150076 Arrb2-010 protein_coding Mus_musculus 1e-36 158
ENSMUST00000124943 Arrb2-009 protein_coding Mus_musculus 5e-20 102

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