C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: early B cell factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138452 Ebf1-007 ENSMUSG00000057098 10090 + 11:44621761-44643459 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000138452
Transcript ID Brain
ENSMUST00000138452 8.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008O4 CIL_0008O4_0002 VISTA 11:44325594-44926697
CIL_0008X2 CIL_0008X2_0002 VISTA 11:44334332-44935609
CIL_00087L CIL_00087L_0002 VISTA 11:44356475-44957869
CIL_0007UN CIL_0007UN_0002 VISTA 11:44499727-45101437
CIL_00043G CIL_00043G_0002 CGP 11:44518964-45008091
CIL_0008FV CIL_0008FV_0002 VISTA 11:44603240-45204998
CIL_0005AQ CIL_0005AQ_0002 CGP 11:44617317-45910625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313708 EBF1-001 protein_coding Homo_sapiens 0 307
ENST00000380654 EBF1-002 protein_coding Homo_sapiens 0 198
ENST00000517373 EBF1-006 protein_coding Homo_sapiens 0 307
ENST00000518836 EBF1-010 processed_transcript Homo_sapiens 0 307
ENST00000519739 EBF1-009 retained_intron Homo_sapiens 0 309
ENST00000519890 EBF1-005 retained_intron Homo_sapiens 4e-23 115
ENST00000522192 EBF1-003 retained_intron Homo_sapiens 0 307
ENST00000523315 EBF1-004 processed_transcript Homo_sapiens 0 198

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