C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single-stranded DNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138488 Ssbp2-007 ENSMUSG00000003992 10090 + 13:91461127-91539399 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000922 CIL_000922_0002 VISTA 13:90886994-91490170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003697 IEA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320672 SSBP2-001 protein_coding Homo_sapiens 0 344
ENST00000504174 SSBP2-010 processed_transcript Homo_sapiens 8e-27 124
ENST00000505980 SSBP2-007 protein_coding Homo_sapiens 0 243
ENST00000506960 SSBP2-014 retained_intron Homo_sapiens 0 207
ENST00000507472 SSBP2-017 processed_transcript Homo_sapiens 0 226
ENST00000507655 SSBP2-012 processed_transcript Homo_sapiens 5e-25 119
ENST00000508912 SSBP2-016 retained_intron Homo_sapiens 1.4013e-45 185
ENST00000509013 SSBP2-013 protein_coding Homo_sapiens 4e-25 119
ENST00000509053 SSBP2-006 protein_coding Homo_sapiens 0 244
ENST00000512098 SSBP2-011 processed_transcript Homo_sapiens 3e-25 119
ENST00000514493 SSBP2-003 protein_coding Homo_sapiens 0 344
ENST00000515395 SSBP2-004 protein_coding Homo_sapiens 0 335
ENST00000615665 SSBP2-201 protein_coding Homo_sapiens 0 344
ENST00000622130 SSBP2-202 protein_coding Homo_sapiens 0 315

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