C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H3 histone, family 3B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139378 H3f3b-003 ENSMUSG00000016559 10090 - 11:116023509-116024473 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastOvaryPlacentaENSMUST00000139378
Transcript ID Adrenal Brain Breast Ovary Placenta
ENSMUST00000139378 5.354±0.00 43.605±0.00 13.753±0.00 40.942±36.51 63.620±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078Q CIL_00078Q_0002 CGP 11:116008457-116027962
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078R CIL_00078R_0002 CGP 11:116021912-116061214

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254810 H3F3B-001 protein_coding Homo_sapiens 0 435
ENST00000340398 H3F3C-001 protein_coding Homo_sapiens 0 381
ENST00000586270 H3F3B-006 protein_coding Homo_sapiens 0 435
ENST00000586518 H3F3B-012 retained_intron Homo_sapiens 0 200
ENST00000586607 H3F3B-003 protein_coding Homo_sapiens 0 436
ENST00000587171 H3F3B-009 protein_coding Homo_sapiens 0 394
ENST00000587560 H3F3B-007 protein_coding Homo_sapiens 0 436
ENST00000589417 H3F3B-004 retained_intron Homo_sapiens 0 198
ENST00000589599 H3F3B-005 protein_coding Homo_sapiens 0 433
ENST00000589949 H3F3B-008 retained_intron Homo_sapiens 0 198
ENST00000591890 H3F3B-011 protein_coding Homo_sapiens 0 385
ENST00000592643 H3F3B-010 protein_coding Homo_sapiens 0 296

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