C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00078Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108479-ENSG00000132475 CGP 9606 17:75751594-75785893
GeneTranscriptPositionBiotype
ENSG00000108479 (GALK1)
galactokinase 1 		ENST00000225614 (GALK1-002) 75751594-75765236 protein_coding
ENST00000586244 (GALK1-003) 75762758-75765192 nonsense_mediated_decay
ENST00000586733 (GALK1-008) 75757972-75758518 retained_intron
ENST00000587707 (GALK1-006) 75758512-75764005 nonsense_mediated_decay
ENST00000588479 (GALK1-001) 75757944-75765711 protein_coding
ENST00000589030 (GALK1-005) 75763383-75765133 retained_intron
ENST00000589643 (GALK1-009) 75751679-75758519 retained_intron
ENST00000592494 (GALK1-004) 75758591-75765157 retained_intron
ENST00000592997 (GALK1-007) 75757894-75763090 protein_coding
ENSG00000132470 (ITGB4)
integrin, beta 4 		ENST00000200181 (ITGB4-001) 75721436-75757818 protein_coding
ENST00000449880 (ITGB4-003) 75724696-75757818 protein_coding
ENST00000450894 (ITGB4-002) 75721497-75757815 protein_coding
ENST00000578318 (ITGB4-014) 75757039-75757818 protein_coding
ENST00000579211 (ITGB4-013) 75754483-75755778 retained_intron
ENST00000579662 (ITGB4-007) 75721328-75757604 protein_coding
ENST00000580542 (ITGB4-004) 75721509-75741105 retained_intron
ENST00000582629 (ITGB4-008) 75727801-75757818 protein_coding
ENST00000583327 (ITGB4-011) 75751813-75755808 protein_coding
ENST00000584025 (ITGB4-010) 75742424-75749045 retained_intron
ENST00000584374 (ITGB4-009) 75731820-75739905 processed_transcript
ENST00000584558 (ITGB4-005) 75724704-75742657 processed_transcript
ENST00000584939 (ITGB4-012) 75754618-75757002 protein_coding
ENSG00000132475 (H3F3B)
H3 histone, family 3B (H3.3B) 		ENST00000254810 (H3F3B-001) 75776434-75779779 protein_coding
ENST00000586270 (H3F3B-006) 75778610-75779603 protein_coding
ENST00000586518 (H3F3B-012) 75778072-75779772 retained_intron
ENST00000586607 (H3F3B-003) 75778576-75785486 protein_coding
ENST00000587171 (H3F3B-009) 75778638-75779778 protein_coding
ENST00000587560 (H3F3B-007) 75778567-75779286 protein_coding
ENST00000589417 (H3F3B-004) 75778647-75779779 retained_intron
ENST00000589599 (H3F3B-005) 75778574-75779780 protein_coding
ENST00000589949 (H3F3B-008) 75778453-75779766 retained_intron
ENST00000591890 (H3F3B-011) 75778325-75779759 protein_coding
ENST00000591893 (H3F3B-013) 75783107-75785893 retained_intron
ENST00000592643 (H3F3B-010) 75778250-75779758 protein_coding
ENST00000593254 (H3F3B-002) 75778020-75779778 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_00078Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020766-ENSMUSG00000016559 CGP 10090 11:116008457-116027962
GeneTranscriptPositionBiotype
ENSMUSG00000016559 (H3f3b)
H3 histone, family 3B 		ENSMUST00000016703 (H3f3b-201) 116021961-116024504 protein_coding
ENSMUST00000106454 (H3f3b-001) 116021912-116027962 protein_coding
ENSMUST00000139378 (H3f3b-003) 116023509-116024473 processed_transcript
ENSMUST00000139623 (H3f3b-002) 116023193-116024514 processed_transcript
ENSMUSG00000020766 (Galk1)
galactokinase 1 		ENSMUST00000021114 (Galk1-001) 116008457-116012719 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078Q_0001ENSG00000108479ENST00000225614ENST00000586244ENST00000586733ENST00000587707ENST00000588479ENST00000589030ENST00000589643ENST00000592494ENST00000592997ENSG00000132470ENST00000200181ENST00000449880ENST00000450894ENST00000578318ENST00000579211ENST00000579662ENST00000580542ENST00000582629ENST00000583327ENST00000584025ENST00000584374ENST00000584558ENST00000584939ENSG00000132475ENST00000254810ENST00000586270ENST00000586518ENST00000586607ENST00000587171ENST00000587560ENST00000589417ENST00000589599ENST00000589949ENST00000591890ENST00000591893ENST00000592643ENST00000593254CIL_00078Q_0002ENSMUSG00000016559ENSMUST00000016703ENSMUST00000106454ENSMUST00000139378ENSMUST00000139623ENSMUSG00000020766ENSMUST00000021114
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078Q_0001ENSG00000108479ENST00000225614ENST00000587707ENST00000588479ENST00000589030ENST00000592494ENST00000592997ENSG00000132470ENST00000200181ENST00000449880ENST00000450894ENST00000578318ENST00000579662ENST00000580542ENST00000582629ENST00000584558ENSG00000132475ENST00000254810ENST00000586270ENST00000586607ENST00000587171ENST00000589599ENST00000591890ENST00000592643ENST00000593254CIL_00078Q_0002ENSMUSG00000016559ENSMUST00000016703ENSMUST00000139378ENSMUST00000139623ENSMUSG00000020766ENSMUST00000021114
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108479 ENST00000225614 8.611±0.00 8.856±0.00 N/A 1.909±1.50 2.884±1.81 1.622±0.89 2.378±2.23 9.402±0.57 27.849±0.00 5.562±0.00 2.247±0.00 7.978±5.76 13.632±5.27 5.649±2.75
ENST00000586244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587707 4.317±0.00 3.507±0.00 1.328±0.00 1.357±0.23 3.709±0.00 1.554±0.58 0.924±0.52 5.689±1.64 15.622±0.00 4.899±0.00 2.273±0.00 2.444±1.07 N/A N/A
ENST00000588479 N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589030 N/A N/A N/A N/A 0.633±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592494 N/A N/A 3.444±0.00 N/A 2.059±0.00 0.195±0.00 N/A N/A N/A N/A 1.062±0.00 N/A N/A N/A
ENST00000592997 3.323±0.00 7.583±0.00 N/A N/A 2.739±0.00 3.471±0.00 1.725±0.00 6.224±0.00 17.051±0.00 3.613±0.00 0.559±0.00 10.527±2.74 7.471±1.65 3.844±2.70
ENSG00000132470 ENST00000200181 2.160±0.00 3.195±0.00 N/A 2.573±2.13 1.732±0.91 N/A N/A N/A 0.600±0.00 1.314±0.00 0.468±0.00 N/A N/A 1.323±0.00
ENST00000449880 8.662±0.00 N/A 0.318±0.00 7.068±0.00 N/A 13.185±0.00 1.918±0.00 1.224±0.00 0.111±0.00 3.613±1.66 0.718±0.00 5.887±0.15 N/A 0.639±0.00
ENST00000450894 N/A N/A N/A 5.935±0.00 N/A 4.080±0.00 N/A 0.881±0.00 N/A N/A N/A 2.922±1.46 49.208±11.58 N/A
ENST00000578318 N/A N/A N/A N/A N/A N/A N/A 0.363±0.00 N/A N/A N/A N/A N/A N/A
ENST00000579211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579662 2.042±0.00 8.263±0.00 N/A 5.356±0.00 8.127±6.55 16.532±0.00 0.541±0.00 2.856±0.00 0.110±0.00 N/A N/A 10.050±7.85 18.241±9.53 2.193±1.96
ENST00000580542 N/A N/A 1.274±0.00 0.600±0.00 4.363±0.00 7.669±0.00 0.505±0.00 0.210±0.00 3.331±0.00 4.595±0.00 N/A 7.223±0.00 N/A N/A
ENST00000582629 N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A N/A N/A
ENST00000583327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584558 N/A N/A N/A 0.734±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132475 ENST00000254810 33.682±0.00 129.909±0.00 8.435±0.00 71.541±51.55 45.715±22.21 37.396±16.58 11.268±5.49 29.212±23.74 11.682±6.70 72.258±42.13 12.857±1.99 118.346±76.38 30.116±12.96 55.127±27.35
ENST00000586270 N/A N/A 97.947±0.00 134.111±0.00 199.734±0.00 202.769±0.00 50.696±0.00 121.948±0.00 179.935±0.00 112.090±0.00 156.804±0.00 381.073±0.00 211.435±2.94 N/A
ENST00000586518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586607 N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.551±0.00 N/A N/A N/A N/A
ENST00000587171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 315.495±0.00
ENST00000587560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1162.310±0.00 N/A N/A
ENST00000589949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591890 N/A N/A N/A N/A N/A N/A 31.393±0.00 N/A 23.601±0.00 N/A 27.185±0.00 111.835±0.00 N/A N/A
ENST00000591893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592643 N/A N/A N/A N/A N/A 92.726±0.00 N/A N/A N/A N/A N/A N/A 76.321±8.58 210.679±0.00
ENST00000593254 N/A N/A 14.484±0.00 23.588±0.00 42.827±0.00 N/A N/A 66.560±0.00 32.242±0.00 31.129±0.00 14.802±0.00 251.486±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016559 ENSMUST00000016703 69.294±37.47 40.182±6.27 120.504±8.09 260.945±186.75 77.815±38.30 168.726±35.20 27.330±5.15 60.922±17.60 115.775±80.43 165.665±5.57 16.905±1.81 98.914±28.63 111.435±73.49 88.380±39.64
ENSMUST00000106454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139378 N/A 5.354±0.00 N/A 43.605±0.00 13.753±0.00 N/A N/A N/A N/A N/A N/A 40.942±36.51 63.620±0.00 N/A
ENSMUST00000139623 23.245±5.77 N/A 80.409±18.54 51.761±0.00 21.108±1.97 30.646±0.00 12.049±3.20 30.323±10.29 92.939±21.37 N/A 12.049±1.55 123.985±0.00 183.548±77.60 84.199±3.34
ENSMUSG00000020766 ENSMUST00000021114 15.374±3.85 28.743±5.69 24.383±3.41 11.716±4.46 14.330±6.19 18.482±1.13 5.763±1.38 34.659±2.60 48.534±18.94 18.936±2.28 1.231±0.34 38.765±14.08 107.751±67.78 11.606±3.84

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