C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140470 Taf1-004 ENSMUSG00000031314 10090 + X:101590547-101600571 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000140470
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000140470 0.889±0.00 46.025±0.00 29.793±0.00 28.387±0.94 8.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066O CIL_00066O_0002 CGP X:101449088-101601789
CIL_0000TR CIL_0000TR_0002 CGP X:101532734-101684351

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242310 TAF1L-001 protein_coding Homo_sapiens 0 496
ENST00000276072 TAF1-008 protein_coding Homo_sapiens 0 819
ENST00000373775 TAF1-014 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000373790 TAF1-009 protein_coding Homo_sapiens 0 819
ENST00000423759 TAF1-201 protein_coding Homo_sapiens 0 791
ENST00000437147 TAF1-010 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000461157 TAF1-022 processed_transcript Homo_sapiens 0 418
ENST00000461764 TAF1-021 processed_transcript Homo_sapiens 0 486
ENST00000462588 TAF1-012 processed_transcript Homo_sapiens 0 486
ENST00000467309 TAF1-016 processed_transcript Homo_sapiens 0 291
ENST00000468167 TAF1-011 processed_transcript Homo_sapiens 0 693
ENST00000482544 TAF1-018 processed_transcript Homo_sapiens 0 486
ENST00000485087 TAF1-013 processed_transcript Homo_sapiens 0 721
ENST00000492404 TAF1-015 processed_transcript Homo_sapiens 0 819

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