C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TIA1 cytotoxic granule-associated RNA binding protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497671 TIAL1-007 ENSG00000151923 9606 - 10:119575412-119597029 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastOvaryENST00000497671
Transcript ID Bladder Breast Ovary
ENST00000497671 0.652±0.00 2.727±0.00 7.169±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IZ CIL_0003IZ_0001 CGP 10:119499828-119597029
CIL_0004GP CIL_0004GP_0002 CGP 10:119571802-119677819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123666 Tial1-003 nonsense_mediated_decay Mus_musculus 0 3258
ENSMUST00000165023 Tial1-201 protein_coding Mus_musculus 0 1445
ENSMUST00000033135 Tial1-004 protein_coding Mus_musculus 0 1445
ENSMUST00000133444 Tial1-002 processed_transcript Mus_musculus 0 1445
ENSMUST00000106226 Tial1-001 protein_coding Mus_musculus 0 1445
ENSMUST00000141126 Tial1-005 processed_transcript Mus_musculus 0 1393
ENSMUST00000141079 Tial1-007 retained_intron Mus_musculus 0 1120
ENSMUST00000133089 Tial1-010 processed_transcript Mus_musculus 0 1027
ENSMUST00000106228 Tial1-006 protein_coding Mus_musculus 0 525
ENSMUST00000136782 Tial1-009 retained_intron Mus_musculus 0 446
ENSMUST00000152328 Tial1-008 retained_intron Mus_musculus 0 342
ENSDART00000022799 tial1-001 protein_coding Danio_rerio 0 294

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