C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: xeroderma pigmentosum, complementation group A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141318 Xpa-004 ENSMUSG00000028329 10090 - 4:46175222-46185682 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_0002JD CIL_0002JD_0002 CGP 4:46114746-46172403
CIL_00029T CIL_00029T_0002 CGP 4:46138613-46196311
CIL_00029U CIL_00029U_0002 CGP 4:46155347-46346412

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375128 XPA-001 protein_coding Homo_sapiens 0 534
ENST00000462523 XPA-003 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000496104 XPA-002 processed_transcript Homo_sapiens 0 217

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