C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | pre B cell leukemia homeobox 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000141653  |
Pbx3-009 |
ENSMUSG00000038718 |
10090 | - |
2:34224407-34371253  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007X9 | CIL_0007X9_0002 | VISTA | 2:33575330-34178839 |
| CIL_00095V | CIL_00095V_0002 | VISTA | 2:33716020-34317341 |
| CIL_0007YU | CIL_0007YU_0002 | VISTA | 2:33733022-34333763 |
| CIL_0007LN | CIL_0007LN_0002 | UCNEbase | 2:33746984-34647960 |
| CIL_0008R2 | CIL_0008R2_0002 | VISTA | 2:33764832-34366528 |
| CIL_000960 | CIL_000960_0002 | VISTA | 2:33866778-34467772 |
| CIL_000849 | CIL_000849_0002 | VISTA | 2:33929436-34530577 |
| CIL_0007QH | CIL_0007QH_0002 | VISTA | 2:33935168-34536289 |
| CIL_0007YW | CIL_0007YW_0002 | VISTA | 2:33955333-34557138 |
| CIL_00086D | CIL_00086D_0002 | VISTA | 2:33960195-34561369 |
| CIL_0008I6 | CIL_0008I6_0002 | VISTA | 2:33986508-34588340 |
| CIL_000848 | CIL_000848_0002 | VISTA | 2:34010581-34611103 |
| CIL_0008R5 | CIL_0008R5_0002 | VISTA | 2:34054690-34656547 |
| CIL_000961 | CIL_000961_0002 | VISTA | 2:34056455-34659025 |
| CIL_0008GT | CIL_0008GT_0002 | VISTA | 2:34059231-34660874 |
| CIL_0008Q0 | CIL_0008Q0_0002 | VISTA | 2:34063448-34664810 |
| CIL_0008LX | CIL_0008LX_0002 | VISTA | 2:34155217-34756803 |
| CIL_00080V | CIL_00080V_0002 | VISTA | 2:34162107-34763282 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0002087 | IMP | regulation of respiratory gaseous exchange by neurological system process |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005667 | IDA | transcription factor complex |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0007585 | IMP | respiratory gaseous exchange |
| GO:0008344 | IMP | adult locomotory behavior |
| GO:0021516 | IMP | dorsal spinal cord development |
| GO:0043565 | IDA | sequence-specific DNA binding |
| GO:0048666 | IMP | neuron development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000342287
|
PBX3-001 | protein_coding | Homo_sapiens | 0 | 555 |
|
ENST00000373487
|
PBX3-007 | protein_coding | Homo_sapiens | 0 | 555 |
|
ENST00000373489
|
PBX3-006 | protein_coding | Homo_sapiens | 0 | 555 |
|
ENST00000428092
|
PBX3-008 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000447726
|
PBX3-002 | protein_coding | Homo_sapiens | 0 | 553 |
|
ENST00000491160
|
PBX3-014 | processed_transcript | Homo_sapiens | 0 | 333 |
|
ENST00000491787
|
PBX3-009 | protein_coding | Homo_sapiens | 0 | 553 |
|
ENST00000538998
|
PBX3-013 | processed_transcript | Homo_sapiens | 0 | 436 |
