C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sidekick homolog 2 (chicken)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141943 Sdk2-003 ENSMUSG00000041592 10090 - 11:113848562-114065975 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryENSMUST00000141943
Transcript ID Heart Ovary
ENSMUST00000141943 0.098±0.00 0.333±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R4 CIL_0007R4_0002 VISTA 11:113433041-114034346
CIL_0008QM CIL_0008QM_0002 VISTA 11:113678008-114283381
CIL_0003AC CIL_0003AC_0003 CGP 11:113726850-114067046
CIL_00073F CIL_00073F_0002 CGP 11:113776374-114672331

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000085121 sdk2b-201 protein_coding Danio_rerio 0 1103
ENSDART00000140353 sdk2b-001 protein_coding Danio_rerio 0 1103
ENST00000392650 SDK2-002 protein_coding Homo_sapiens 0 2760
ENST00000479356 SDK2-001 retained_intron Homo_sapiens 0 1772

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