C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin, beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143232 Arrb2-002 ENSMUSG00000060216 10090 + 11:70437292-70439553 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverOvaryTestisENSMUST00000143232
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Ovary Testis
ENSMUST00000143232 9.824±3.38 5.219±0.15 15.058±2.26 5.526±1.21 3.600±0.00 5.228±0.45 3.660±1.58 9.715±2.72 2.426±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PS CIL_0001PS_0002 CGP 11:70392883-70440828
CIL_000106 CIL_000106_0002 CGP 11:70432635-70453727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269260 ARRB2-002 protein_coding Homo_sapiens 0 728
ENST00000346341 ARRB2-001 protein_coding Homo_sapiens 0 728
ENST00000381488 ARRB2-009 protein_coding Homo_sapiens 0 728
ENST00000412477 ARRB2-006 protein_coding Homo_sapiens 0 728
ENST00000571206 ARRB2-008 protein_coding Homo_sapiens 0 728
ENST00000571428 ARRB2-020 protein_coding Homo_sapiens 0 595
ENST00000572457 ARRB2-003 protein_coding Homo_sapiens 0 728
ENST00000573886 ARRB2-018 retained_intron Homo_sapiens 0 235
ENST00000574502 ARRB2-010 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000574954 ARRB2-004 protein_coding Homo_sapiens 0 728
ENST00000575877 ARRB2-007 protein_coding Homo_sapiens 0 459
ENST00000576235 ARRB2-021 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000577054 ARRB2-019 retained_intron Homo_sapiens 0 241

Loading