C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | NOP56 ribonucleoprotein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143547  |
Nop56-012 |
ENSMUSG00000027405 |
10090 | + |
2:130276597-130277959  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SG | CIL_0007SG_0002 | VISTA | 2:130051805-130652389 |
| CIL_0000FW | CIL_0000FW_0002 | CGP | 2:130195194-130279313 |
| CIL_0000FV | CIL_0000FV_0002 | CGP | 2:130274430-130284547 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000329276
|
NOP56-009 | protein_coding | Homo_sapiens | 2e-37 | 161 |
|
ENST00000415272
|
NOP56-010 | protein_coding | Homo_sapiens | 2e-37 | 161 |
|
ENST00000447491
|
NOP56P2-001 | processed_pseudogene | Homo_sapiens | 0 | 237 |
|
ENST00000466447
|
NOP56-006 | processed_transcript | Homo_sapiens | 0 | 531 |
|
ENST00000467196
|
NOP56-007 | nonsense_mediated_decay | Homo_sapiens | 1e-37 | 161 |
|
ENST00000480447
|
NOP56-004 | processed_transcript | Homo_sapiens | 3e-16 | 90 |
|
ENST00000480992
|
NOP56-003 | processed_transcript | Homo_sapiens | 0 | 621 |
|
ENST00000484998
|
NOP56-017 | processed_transcript | Homo_sapiens | 0 | 621 |
|
ENST00000492135
|
NOP56-011 | processed_transcript | Homo_sapiens | 0 | 736 |
|
ENST00000612233
|
NOP56-019 | retained_intron | Homo_sapiens | 0 | 392 |
|
ENST00000616692
|
NOP56-020 | retained_intron | Homo_sapiens | 0 | 392 |
