C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | neutral sphingomyelinase (N-SMase) activation associated factor | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143566  |
Nsmaf-003 |
ENSMUSG00000028245 |
10090 | - |
4:6406400-6454255  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001T7 | CIL_0001T7_0002 | CGP | 4:6265612-6408423 |
| CIL_0002RG | CIL_0002RG_0002 | CGP | 4:6365650-6454271 |
| CIL_0001SZ | CIL_0001SZ_0002 | CGP | 4:6396207-6991557 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000038176
|
NSMAF-001 | protein_coding | Homo_sapiens | 0 | 2235 |
|
ENST00000427130
|
NSMAF-002 | protein_coding | Homo_sapiens | 0 | 2235 |
|
ENST00000517612
|
NSMAF-010 | retained_intron | Homo_sapiens | 0 | 438 |
|
ENST00000518159
|
NSMAF-003 | nonsense_mediated_decay | Homo_sapiens | 4e-35 | 152 |
|
ENST00000518229
|
NSMAF-004 | nonsense_mediated_decay | Homo_sapiens | 3e-35 | 152 |
|
ENST00000519166
|
NSMAF-009 | retained_intron | Homo_sapiens | 0 | 211 |
|
ENST00000519174
|
NSMAF-014 | retained_intron | Homo_sapiens | 8e-32 | 141 |
|
ENST00000519227
|
NSMAF-006 | retained_intron | Homo_sapiens | 0 | 503 |
|
ENST00000519858
|
NSMAF-012 | processed_transcript | Homo_sapiens | 0 | 998 |
|
ENST00000521712
|
NSMAF-015 | retained_intron | Homo_sapiens | 0 | 261 |
|
ENST00000522645
|
NSMAF-005 | retained_intron | Homo_sapiens | 0 | 351 |
|
ENST00000523106
|
NSMAF-007 | retained_intron | Homo_sapiens | 0 | 665 |
|
ENST00000523177
|
NSMAF-013 | processed_transcript | Homo_sapiens | 0 | 529 |
|
ENST00000523982
|
NSMAF-016 | processed_transcript | Homo_sapiens | 0 | 603 |
|
ENST00000524148
|
NSMAF-008 | retained_intron | Homo_sapiens | 0 | 213 |
