C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neutral sphingomyelinase (N-SMase) activation associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519858 NSMAF-012 ENSG00000035681 9606 - 8:58601168-58623419 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverLungMuscleOvaryENST00000519858
Transcript ID Bladder Brain Breast Kidney Liver Lung Muscle Ovary
ENST00000519858 3.054±0.00 5.733±0.00 4.118±0.00 1.367±0.00 7.217±0.00 6.001±0.00 8.037±0.00 8.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RG CIL_0002RG_0001 CGP 8:58552924-58659844
CIL_0008PQ CIL_0008PQ_0001 VISTA 8:58557235-59160028
CIL_0001SZ CIL_0001SZ_0001 CGP 8:58583504-59119208

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143566 Nsmaf-003 processed_transcript Mus_musculus 0 998
ENSMUST00000029910 Nsmaf-001 protein_coding Mus_musculus 0 998
ENSMUST00000143704 Nsmaf-002 retained_intron Mus_musculus 0 811
ENSMUST00000143983 Nsmaf-009 retained_intron Mus_musculus 0 416
ENSMUST00000156078 Nsmaf-004 retained_intron Mus_musculus 0 313
ENSMUST00000156283 Nsmaf-007 processed_transcript Mus_musculus 0 200

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