C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neutral sphingomyelinase (N-SMase) activation associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522645 NSMAF-005 ENSG00000035681 9606 - 8:58631365-58659698 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000522645
Transcript ID Muscle
ENST00000522645 4.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RG CIL_0002RG_0001 CGP 8:58552924-58659844
CIL_0008PQ CIL_0008PQ_0001 VISTA 8:58557235-59160028
CIL_0001SZ CIL_0001SZ_0001 CGP 8:58583504-59119208

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143704 Nsmaf-002 retained_intron Mus_musculus 0 435
ENSMUST00000029910 Nsmaf-001 protein_coding Mus_musculus 0 435
ENSMUST00000124344 Nsmaf-011 protein_coding Mus_musculus 0 411
ENSMUST00000143566 Nsmaf-003 processed_transcript Mus_musculus 0 351
ENSMUST00000156715 Nsmaf-006 processed_transcript Mus_musculus 8e-17 92

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