C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: rho/rac guanine nucleotide exchange factor (GEF) 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145360 Arhgef18-006 ENSMUSG00000004568 10090 + 8:3450758-3454268 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryENSMUST00000145360
Transcript ID Adrenal Breast Colon Ovary
ENSMUST00000145360 8.672±1.23 19.390±0.00 14.760±3.43 18.915±2.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YI CIL_0004YI_0002 CGP 8:3353415-3456601
CIL_0002U4 CIL_0002U4_0002 CGP 8:3393006-3467680

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319670 ARHGEF18-002 protein_coding Homo_sapiens 0 368
ENST00000359920 ARHGEF18-001 protein_coding Homo_sapiens 0 368
ENST00000593531 CTD-2207O23.3-001 protein_coding Homo_sapiens 0 368
ENST00000594665 ARHGEF18-003 protein_coding Homo_sapiens 0 368
ENST00000617428 CTD-2207O23.3-201 protein_coding Homo_sapiens 0 368

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