C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002U4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104880-ENSG00000104883 CGP 9606 19:7395113-7497449
GeneTranscriptPositionBiotype
ENSG00000104880 (ARHGEF18)
Rho/Rac guanine nucleotide exchange factor (GEF) 18 		ENST00000319670 (ARHGEF18-002) 7395113-7472477 protein_coding
ENST00000359920 (ARHGEF18-001) 7439688-7472477 protein_coding
ENST00000594665 (ARHGEF18-003) 7447063-7472477 protein_coding
ENST00000595600 (ARHGEF18-005) 7441719-7444429 retained_intron
ENST00000599752 (ARHGEF18-006) 7395152-7441990 protein_coding
ENSG00000104883 (PEX11G)
peroxisomal biogenesis factor 11 gamma 		ENST00000221480 (PEX11G-001) 7476875-7489019 protein_coding
ENST00000593547 (PEX11G-004) 7476901-7488972 protein_coding
ENST00000593942 (PEX11G-002) 7476876-7497449 protein_coding
ENST00000599519 (PEX11G-003) 7476894-7483312 processed_transcript
ENSG00000198723 (C19orf45)
chromosome 19 open reading frame 45 		ENST00000361664 (C19orf45-001) 7497559-7508450 protein_coding
ENST00000596132 (C19orf45-002) 7492976-7504213 protein_coding
ENST00000596524 (C19orf45-006) 7501273-7506066 nonsense_mediated_decay
ENST00000597207 (C19orf45-008) 7498927-7501364 protein_coding
ENST00000600112 (C19orf45-005) 7505520-7506700 retained_intron
ENST00000601176 (C19orf45-003) 7499642-7501399 protein_coding
ENST00000601292 (C19orf45-007) 7506795-7508447 retained_intron
ENSG00000268861 (CTD-2207O23.3)
Rho guanine nucleotide exchange factor 18 {ECO:0000313|Ensembl:ENSP00000471597} 		ENST00000593531 (CTD-2207O23.3-001) 7380964-7470245 protein_coding
ENST00000617428 (CTD-2207O23.3-201) 7382834-7472477 protein_coding
CIL_0002U4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004568-ENSMUSG00000069633 CGP 10090 8:3393006-3467680
GeneTranscriptPositionBiotype
ENSMUSG00000004568 (Arhgef18)
rho/rac guanine nucleotide exchange factor (GEF) 18 		ENSMUST00000004684 (Arhgef18-001) 3393038-3456601 protein_coding
ENSMUST00000130587 (Arhgef18-005) 3393073-3429271 processed_transcript
ENSMUST00000131773 (Arhgef18-002) 3393006-3450640 retained_intron
ENSMUST00000145360 (Arhgef18-006) 3450758-3454268 retained_intron
ENSMUST00000145394 (Arhgef18-004) 3393073-3429639 protein_coding
ENSMUST00000156085 (Arhgef18-003) 3437011-3456600 retained_intron
ENSMUSG00000069633 (Pex11g)
peroxisomal biogenesis factor 11 gamma 		ENSMUST00000004686 (Pex11g-001) 3457105-3467680 protein_coding
ENSMUST00000111081 (Pex11g-003) 3457108-3467645 protein_coding
ENSMUST00000118194 (Pex11g-002) 3463220-3467670 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U4_0001ENSG00000104880ENST00000319670ENST00000359920ENST00000594665ENST00000595600ENST00000599752ENSG00000104883ENST00000221480ENST00000593547ENST00000593942ENST00000599519ENSG00000198723ENST00000361664ENST00000596132ENST00000596524ENST00000597207ENST00000600112ENST00000601176ENST00000601292ENSG00000268861ENST00000593531ENST00000617428CIL_0002U4_0002ENSMUSG00000004568ENSMUST00000004684ENSMUST00000130587ENSMUST00000131773ENSMUST00000145360ENSMUST00000145394ENSMUST00000156085ENSMUSG00000069633ENSMUST00000004686ENSMUST00000111081ENSMUST00000118194
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U4_0001ENSG00000104880ENST00000319670ENST00000594665ENST00000599752ENSG00000104883ENST00000221480ENST00000593547ENST00000593942ENST00000599519ENSG00000198723ENST00000361664ENSG00000268861ENST00000593531ENST00000617428CIL_0002U4_0002ENSMUSG00000004568ENSMUST00000004684ENSMUST00000131773ENSMUST00000145360ENSMUSG00000069633ENSMUST00000004686ENSMUST00000111081ENSMUST00000118194
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104880 ENST00000319670 2.240±0.00 6.066±0.00 0.630±0.00 5.949±0.00 2.713±0.00 2.790±0.00 1.093±0.00 4.259±3.36 1.236±0.25 4.599±0.00 0.749±0.57 4.167±2.76 4.277±0.88 2.501±0.42
ENST00000359920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594665 N/A 10.847±0.00 N/A 3.604±0.00 3.347±0.00 2.497±0.00 0.754±0.00 5.909±0.00 0.968±0.00 3.000±0.00 0.516±0.00 5.761±0.77 2.866±0.02 4.667±0.00
ENST00000595600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.804±0.00 N/A N/A N/A
ENSG00000104883 ENST00000221480 1.215±0.00 1.413±0.00 0.296±0.00 1.037±0.63 3.511±0.00 0.594±0.35 0.621±0.00 1.005±0.45 5.222±0.00 0.751±0.00 0.191±0.00 1.740±0.64 2.002±0.57 6.451±0.65
ENST00000593547 N/A N/A N/A N/A N/A N/A N/A 1.022±0.00 N/A N/A 0.105±0.00 0.308±0.00 0.244±0.00 2.305±0.00
ENST00000593942 0.143±0.00 N/A N/A 0.583±0.00 N/A 0.322±0.00 0.026±0.00 N/A N/A 0.265±0.00 N/A 0.832±0.31 N/A 2.117±1.09
ENST00000599519 1.216±0.00 N/A N/A N/A 0.771±0.31 N/A N/A 1.446±0.79 N/A 0.243±0.00 N/A 0.275±0.00 1.141±0.00 N/A
ENSG00000198723 ENST00000361664 N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.519±3.54
ENST00000596132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000268861 ENST00000593531 N/A N/A 0.815±0.00 N/A 1.817±0.00 3.174±0.00 N/A N/A 1.869±0.00 N/A 0.320±0.00 1.106±0.00 N/A N/A
ENST00000617428 N/A 6.615±0.00 N/A N/A N/A 0.929±0.00 N/A N/A N/A N/A 0.635±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004568 ENSMUST00000004684 12.570±1.07 15.481±2.06 15.082±0.73 8.516±0.52 20.661±8.58 13.580±1.58 4.632±0.69 15.490±3.26 5.328±1.85 24.770±2.08 1.834±0.39 13.840±1.81 22.393±17.93 2.867±0.94
ENSMUST00000130587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131773 N/A N/A N/A N/A 4.430±0.00 N/A 1.098±0.07 N/A N/A N/A N/A N/A N/A 1.012±0.00
ENSMUST00000145360 N/A 8.672±1.23 N/A N/A 19.390±0.00 14.760±3.43 N/A N/A N/A N/A N/A 18.915±2.83 N/A N/A
ENSMUST00000145394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000069633 ENSMUST00000004686 5.229±1.48 7.419±1.24 4.094±0.86 0.404±0.00 4.850±0.52 7.227±1.27 1.404±0.04 5.501±0.49 10.667±6.99 3.510±0.37 1.189±0.13 4.381±1.22 1.776±0.55 13.471±6.74
ENSMUST00000111081 N/A 4.613±0.00 N/A N/A N/A 4.466±0.82 N/A 4.188±0.00 N/A 2.018±0.00 0.929±0.00 3.863±1.11 2.112±0.00 6.971±0.00
ENSMUST00000118194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.03 N/A 0.717±0.00 N/A

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