C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146156 Pabpc4-007 ENSMUSG00000011257 10090 + 4:123297180-123298832 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastOvaryENSMUST00000146156
Transcript ID Bladder Breast Ovary
ENSMUST00000146156 5.650±0.00 6.535±0.00 8.534±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000082327 pabpc4-001 protein_coding Danio_rerio 0 206
ENST00000372856 PABPC4-004 protein_coding Homo_sapiens 0 680
ENST00000372857 PABPC4-001 protein_coding Homo_sapiens 0 680
ENST00000372858 PABPC4-002 protein_coding Homo_sapiens 0 680
ENST00000372862 PABPC4-003 protein_coding Homo_sapiens 0 680
ENST00000414338 RP11-393N21.1-001 processed_pseudogene Homo_sapiens 5.99994e-41 171
ENST00000421687 PABPC4-017 protein_coding Homo_sapiens 0 390
ENST00000437136 PABPC4-013 protein_coding Homo_sapiens 0 368
ENST00000468476 PABPC4-006 retained_intron Homo_sapiens 1e-32 147
ENST00000482028 PABPC4-012 retained_intron Homo_sapiens 0 396
ENST00000492468 PABPC4-005 retained_intron Homo_sapiens 0 712
ENST00000530186 PABPC4-024 protein_coding Homo_sapiens 0 298
ENST00000549280 RP11-813P10.2-001 processed_pseudogene Homo_sapiens 0 372
ENST00000555663 CTD-2643K12.1-001 processed_pseudogene Homo_sapiens 0 374

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