C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal antigen 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146934 Stag1-006 ENSMUSG00000037286 10090 + 9:100845050-100956834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000146934
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000146934 1.838±0.00 1.895±0.00 10.858±0.00 0.627±0.00 0.992±0.26 0.641±0.05 0.569±0.00 1.470±0.79 0.919±0.00 0.845±0.00 6.294±9.47 15.255±14.13 4.094±3.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C8 CIL_0001C8_0002 CGP 9:100552188-100959375
CIL_0000WP CIL_0000WP_0002 CGP 9:100597798-101034898

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236698 STAG1-002 protein_coding Homo_sapiens 0 3031
ENST00000383202 STAG1-001 protein_coding Homo_sapiens 0 3866
ENST00000434713 STAG1-201 protein_coding Homo_sapiens 0 1991
ENST00000465961 STAG1-007 retained_intron Homo_sapiens 0 510
ENST00000483235 STAG1-003 nonsense_mediated_decay Homo_sapiens 0 1991
ENST00000487065 STAG1-004 nonsense_mediated_decay Homo_sapiens 0 1280
ENST00000492318 STAG1-006 protein_coding Homo_sapiens 0 835

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