C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal antigen 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487065 STAG1-004 ENSG00000118007 9606 - 3:136417558-136752377 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000487065
Transcript ID Liver
ENST00000487065 4.935±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0030054 IDA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041418 Stag1-004 protein_coding Mus_musculus 0 2795
ENSMUST00000129269 Stag1-001 protein_coding Mus_musculus 0 2795
ENSMUST00000149771 Stag1-016 processed_transcript Mus_musculus 0 2196
ENSMUST00000123302 Stag1-008 nonsense_mediated_decay Mus_musculus 0 1445
ENSMUST00000146934 Stag1-006 protein_coding Mus_musculus 0 1280
ENSDART00000089376 stag1b-201 protein_coding Danio_rerio 0 1037
ENSDART00000142864 stag1b-001 protein_coding Danio_rerio 0 1037
ENSMUST00000138405 Stag1-005 nonsense_mediated_decay Mus_musculus 0 935
ENSMUST00000143816 Stag1-003 retained_intron Mus_musculus 0 737
ENSMUST00000146312 Stag1-002 protein_coding Mus_musculus 0 737
ENSMUST00000155108 Stag1-007 nonsense_mediated_decay Mus_musculus 0 697
ENSMUST00000144005 Stag1-012 retained_intron Mus_musculus 0 516
ENSMUST00000133388 Stag1-011 protein_coding Mus_musculus 0 460
ENSMUST00000143150 Stag1-013 retained_intron Mus_musculus 0 340
ENSMUST00000123315 Stag1-010 retained_intron Mus_musculus 0 307
ENSMUST00000124487 Stag1-009 protein_coding Mus_musculus 0 268
ENSMUST00000143955 Stag1-015 protein_coding Mus_musculus 9.99967e-42 176

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