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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | stromal antigen 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000483235  |
STAG1-003 |
ENSG00000118007 |
9606 | - |
3:136337388-136752378  |
nonsense_mediated_decay |
|
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Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0030054 | IDA | cell junction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000149771
|
Stag1-016 | processed_transcript | Mus_musculus | 0 | 5387 |
|
ENSMUST00000041418
|
Stag1-004 | protein_coding | Mus_musculus | 0 | 2907 |
|
ENSMUST00000129269
|
Stag1-001 | protein_coding | Mus_musculus | 0 | 2907 |
|
ENSMUST00000123302
|
Stag1-008 | nonsense_mediated_decay | Mus_musculus | 0 | 2475 |
|
ENSMUST00000146934
|
Stag1-006 | protein_coding | Mus_musculus | 0 | 1991 |
|
ENSMUST00000155108
|
Stag1-007 | nonsense_mediated_decay | Mus_musculus | 0 | 1592 |
|
ENSMUST00000191345
|
Stag1-017 | retained_intron | Mus_musculus | 0 | 1138 |
|
ENSDART00000089376
|
stag1b-201 | protein_coding | Danio_rerio | 0 | 1136 |
|
ENSDART00000142864
|
stag1b-001 | protein_coding | Danio_rerio | 0 | 1136 |
|
ENSDART00000142601
|
stag1a-001 | protein_coding | Danio_rerio | 0 | 1114 |
|
ENSDART00000088110
|
stag1a-201 | protein_coding | Danio_rerio | 0 | 1103 |
|
ENSMUST00000143955
|
Stag1-015 | protein_coding | Mus_musculus | 0 | 763 |
|
ENSMUST00000143816
|
Stag1-003 | retained_intron | Mus_musculus | 0 | 739 |
|
ENSMUST00000146312
|
Stag1-002 | protein_coding | Mus_musculus | 0 | 739 |
|
ENSMUST00000138405
|
Stag1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 734 |
|
ENSMUST00000144005
|
Stag1-012 | retained_intron | Mus_musculus | 0 | 518 |
|
ENSMUST00000133388
|
Stag1-011 | protein_coding | Mus_musculus | 0 | 460 |
|
ENSMUST00000143150
|
Stag1-013 | retained_intron | Mus_musculus | 0 | 340 |
|
ENSMUST00000123315
|
Stag1-010 | retained_intron | Mus_musculus | 0 | 309 |
|
ENSMUST00000124487
|
Stag1-009 | protein_coding | Mus_musculus | 0 | 268 |
