C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of cancer cell invasion
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147433 Scai-002 ENSMUSG00000035236 10090 - 2:39080044-39190730 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000147433
Transcript ID Adrenal Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000147433 0.253±0.00 0.288±0.00 0.456±0.09 0.244±0.08 0.598±0.05 0.462±0.00 1.153±0.00 1.510±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075F CIL_00075F_0002 CGP 2:39016261-39190730
CIL_00075C CIL_00075C_0002 CGP 2:39066214-39226451

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336505 SCAI-001 protein_coding Homo_sapiens 0 2172
ENST00000373549 SCAI-003 protein_coding Homo_sapiens 0 2170
ENST00000467917 SCAI-006 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000468569 SCAI-005 retained_intron Homo_sapiens 0 270
ENST00000477186 SCAI-004 nonsense_mediated_decay Homo_sapiens 0 1751
ENST00000487795 SCAI-002 processed_transcript Homo_sapiens 0 505
ENST00000494102 SCAI-007 nonsense_mediated_decay Homo_sapiens 0 444

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