C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147954 Gapdh-006 ENSMUSG00000057666 10090 - 6:125161853-125162527 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLiverPlacentaENSMUST00000147954
Transcript ID Adrenal Brain Breast Liver Placenta
ENSMUST00000147954 249.038±0.00 119.797±0.00 322.320±0.00 339.515±35.05 93.184±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 372
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 372
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 372
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 372
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 372
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 291
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 339
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 320
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 294
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 305
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 322
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 265
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 4e-37 159
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 241
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 287
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 372
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 372
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 372
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 219
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 283
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 303
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 287
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 372

Loading