C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 20, subfamily a, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148443 Cyp20a1-003 ENSMUSG00000049439 10090 + 1:60343323-60388060 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonMuscleOvaryTestisENSMUST00000148443
Transcript ID Bladder Brain Breast Colon Muscle Ovary Testis
ENSMUST00000148443 3.817±0.43 1.572±0.65 0.574±0.00 0.568±0.00 0.964±0.35 0.895±0.00 0.178±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QW CIL_0001QW_0002 CGP 1:60180599-60388060
CIL_0000JP CIL_0000JP_0003 CGP 1:60343323-60481158

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356079 CYP20A1-001 protein_coding Homo_sapiens 0 1038
ENST00000429815 CYP20A1-003 protein_coding Homo_sapiens 0 928
ENST00000431118 CYP20A1-005 nonsense_mediated_decay Homo_sapiens 0 1194
ENST00000449301 CYP20A1-002 nonsense_mediated_decay Homo_sapiens 0 634
ENST00000461371 CYP20A1-004 processed_transcript Homo_sapiens 0 1026
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0 632
ENST00000613925 CYP20A1-202 protein_coding Homo_sapiens 0 1038

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