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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | stereocilin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000150332  |
Strc-005 |
ENSMUSG00000033498 |
10090 | - |
2:121372965-121374789  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007WI | CIL_0007WI_0002 | VISTA | 2:121250003-121852600 |
| CIL_000680 | CIL_000680_0002 | CGP | 2:121310561-121363737 |
| CIL_000683 | CIL_000683_0002 | CGP | 2:121357714-121387168 |
| CIL_000682 | CIL_000682_0002 | CGP | 2:121363728-121413792 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000428650
|
STRC-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 505 |
|
ENST00000440125
|
STRC-012 | nonsense_mediated_decay | Homo_sapiens | 2e-26 | 126 |
|
ENST00000448437
|
STRC-003 | retained_intron | Homo_sapiens | 0 | 420 |
|
ENST00000450892
|
STRC-001 | protein_coding | Homo_sapiens | 0 | 416 |
|
ENST00000455136
|
STRC-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 346 |
|
ENST00000470279
|
STRC-009 | retained_intron | Homo_sapiens | 0 | 512 |
|
ENST00000471703
|
STRC-002 | retained_intron | Homo_sapiens | 0 | 289 |
|
ENST00000483250
|
STRC-008 | retained_intron | Homo_sapiens | 0 | 553 |
|
ENST00000485556
|
STRC-004 | retained_intron | Homo_sapiens | 0 | 505 |
|
ENST00000509801
|
STRCP1-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 416 |
|
ENST00000541030
|
STRC-201 | protein_coding | Homo_sapiens | 2e-26 | 126 |
