C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151943 Ubxn6-002 ENSMUSG00000019578 10090 - 17:56068250-56075017 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000151943
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000151943 7.235±1.47 13.677±4.28 7.401±0.99 9.449±3.04 8.034±1.65 7.133±1.90 4.368±0.48 6.574±1.81 4.195±1.37 9.250±3.17 4.657±0.52 12.422±4.13 7.300±0.00 37.429±6.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036Q CIL_00036Q_0002 CGP 17:56016753-56068026
CIL_0001RW CIL_0001RW_0002 CGP 17:56040416-56075028
CIL_0002Z9 CIL_0002Z9_0002 CGP 17:56067045-56100596

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261890 RAB11A-001 protein_coding Homo_sapiens 0.00002 57
ENST00000394807 ZBTB3-001 protein_coding Homo_sapiens 0.000004 58
ENST00000401725 AC019109.1-001 processed_pseudogene Homo_sapiens 0.000000004 68
ENST00000523988 SLC25A30-004 retained_intron Homo_sapiens 0.00000005 66
ENST00000578223 PER1-011 retained_intron Homo_sapiens 0.0000000001 71
ENST00000601372 ZNF558-001 protein_coding Homo_sapiens 0.00001 58

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