C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paxillin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152156 Pxn-005 ENSMUSG00000029528 10090 + 5:115506711-115555982 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000152156
Transcript ID Ovary
ENSMUST00000152156 5.528±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228307 PXN-001 protein_coding Homo_sapiens 0 1162
ENST00000267257 PXN-201 protein_coding Homo_sapiens 0 1164
ENST00000323871 PXN-005 retained_intron Homo_sapiens 0 1162
ENST00000424649 PXN-002 protein_coding Homo_sapiens 0 1572
ENST00000440827 PXN-011 processed_transcript Homo_sapiens 0 361
ENST00000458477 PXN-003 protein_coding Homo_sapiens 0 1572
ENST00000536957 PXN-004 protein_coding Homo_sapiens 0 1162
ENST00000538144 PXN-006 processed_transcript Homo_sapiens 0 1151
ENST00000540221 PXN-010 processed_transcript Homo_sapiens 0 276
ENST00000543331 PXN-009 protein_coding Homo_sapiens 0 512
ENST00000546532 PXN-013 protein_coding Homo_sapiens 0 512
ENST00000547746 PXN-018 processed_transcript Homo_sapiens 0 276
ENST00000547983 PXN-017 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000548912 PXN-012 protein_coding Homo_sapiens 0 512
ENST00000550795 PXN-015 protein_coding Homo_sapiens 0 466
ENST00000551327 PXN-021 processed_transcript Homo_sapiens 0 512
ENST00000552550 PXN-014 protein_coding Homo_sapiens 0 512

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