| Transcript ID | Brain | Colon | Ovary | Placenta |
|---|---|---|---|---|
| ENSMUST00000152391 | 5.166±0.00 | 0.560±0.00 | 2.765±0.00 | 3.033±0.48 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | zinc finger, C3HC type 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000152391  |
Zc3hc1-004 |
ENSMUSG00000039130 |
10090 | - |
6:30366384-30391002  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004DZ | CIL_0004DZ_0002 | CGP | 6:30211289-30391028 |
| CIL_0008PP | CIL_0008PP_0002 | VISTA | 6:30335908-30937352 |
| CIL_0004E3 | CIL_0004E3_0002 | CGP | 6:30366380-30455179 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0008270 | IEA | zinc ion binding |
| GO:2001240 | IDA | negative regulation of extrinsic apoptotic signaling pathway in absence of ligand |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000311873
|
ZC3HC1-201 | protein_coding | Homo_sapiens | 0 | 638 |
|
ENST00000358303
|
ZC3HC1-001 | protein_coding | Homo_sapiens | 0 | 737 |
|
ENST00000360708
|
ZC3HC1-002 | protein_coding | Homo_sapiens | 0 | 737 |
|
ENST00000467642
|
ZC3HC1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 638 |
|
ENST00000471022
|
ZC3HC1-009 | retained_intron | Homo_sapiens | 0 | 359 |
|
ENST00000477578
|
ZC3HC1-005 | retained_intron | Homo_sapiens | 0 | 359 |
|
ENST00000481503
|
ZC3HC1-004 | protein_coding | Homo_sapiens | 0 | 1347 |
|
ENST00000483827
|
ZC3HC1-006 | nonsense_mediated_decay | Homo_sapiens | 3.00018e-42 | 176 |
