C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, C3HC-type containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358303 ZC3HC1-001 ENSG00000091732 9606 - 7:130018286-130051451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000358303
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000358303 1.211±0.00 3.762±0.00 2.632±0.00 3.493±0.00 0.396±0.00 4.593±0.00 2.276±0.00 2.459±0.00 3.787±2.68 4.153±2.53 1.570±0.67 8.599±3.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DZ CIL_0004DZ_0001 CGP 7:129830732-130051451
CIL_0004E3 CIL_0004E3_0001 CGP 7:130018286-130135720

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0007067 IEA mitotic nuclear division
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0019901 IPI protein kinase binding
GO:0031965 IDA nuclear membrane
GO:2001240 IEA negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080812 Zc3hc1-002 protein_coding Mus_musculus 0 1498
ENSMUST00000102992 Zc3hc1-001 protein_coding Mus_musculus 0 1415
ENSMUST00000115184 Zc3hc1-003 protein_coding Mus_musculus 0 983
ENSMUST00000152391 Zc3hc1-004 protein_coding Mus_musculus 0 737
ENSMUST00000136255 Zc3hc1-010 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000138983 Zc3hc1-009 retained_intron Mus_musculus 0 433

Loading