C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, C3HC-type containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481503 ZC3HC1-004 ENSG00000091732 9606 - 7:130018326-130051389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000481503
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000481503 1.956±0.00 0.330±0.00 3.661±0.00 0.710±0.05 1.082±0.00 1.117±0.81 1.142±0.12 0.605±0.00 3.314±0.00 2.449±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DZ CIL_0004DZ_0001 CGP 7:129830732-130051451
CIL_0004E3 CIL_0004E3_0001 CGP 7:130018286-130135720

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152391 Zc3hc1-004 protein_coding Mus_musculus 0 1347
ENSMUST00000102992 Zc3hc1-001 protein_coding Mus_musculus 0 754
ENSMUST00000080812 Zc3hc1-002 protein_coding Mus_musculus 0 754
ENSMUST00000115184 Zc3hc1-003 protein_coding Mus_musculus 0 752
ENSMUST00000138983 Zc3hc1-009 retained_intron Mus_musculus 0 433
ENSMUST00000136255 Zc3hc1-010 nonsense_mediated_decay Mus_musculus 0 359

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