C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186591-ENSG00000091732 CGP 9606 7:129830732-130051451
GeneTranscriptPositionBiotype
ENSG00000091732 (ZC3HC1)
zinc finger, C3HC-type containing 1 		ENST00000311873 (ZC3HC1-201) 130018287-130051451 protein_coding
ENST00000358303 (ZC3HC1-001) 130018286-130051451 protein_coding
ENST00000360708 (ZC3HC1-002) 130018292-130051374 protein_coding
ENST00000467642 (ZC3HC1-003) 130018293-130051374 nonsense_mediated_decay
ENST00000470651 (ZC3HC1-007) 130039507-130051377 nonsense_mediated_decay
ENST00000471022 (ZC3HC1-009) 130023677-130051369 retained_intron
ENST00000477578 (ZC3HC1-005) 130023564-130039626 retained_intron
ENST00000480193 (ZC3HC1-010) 130039275-130051369 protein_coding
ENST00000481503 (ZC3HC1-004) 130018326-130051389 protein_coding
ENST00000483827 (ZC3HC1-006) 130026236-130051374 nonsense_mediated_decay
ENST00000484432 (ZC3HC1-008) 130039519-130051385 nonsense_mediated_decay
ENSG00000186591 (UBE2H)
ubiquitin-conjugating enzyme E2H 		ENST00000355621 (UBE2H-001) 129830732-129952949 protein_coding
ENST00000463272 (UBE2H-010) 129857079-129858969 retained_intron
ENST00000472396 (UBE2H-004) 129839204-129952943 protein_coding
ENST00000473814 (UBE2H-006) 129834937-129952631 protein_coding
ENST00000480245 (UBE2H-008) 129839225-129952531 nonsense_mediated_decay
ENST00000483368 (UBE2H-005) 129834978-129839741 retained_intron
ENST00000486283 (UBE2H-007) 129856973-129880976 retained_intron
ENST00000490974 (UBE2H-003) 129857548-129952722 protein_coding
ENST00000496698 (UBE2H-009) 129834941-129951327 protein_coding
CIL_0004DZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039159-ENSMUSG00000039130 CGP 10090 6:30211289-30391028
GeneTranscriptPositionBiotype
ENSMUSG00000039130 (Zc3hc1)
zinc finger, C3HC type 1 		ENSMUST00000080812 (Zc3hc1-002) 30366380-30391023 protein_coding
ENSMUST00000102992 (Zc3hc1-001) 30366388-30391028 protein_coding
ENSMUST00000115184 (Zc3hc1-003) 30366474-30391010 protein_coding
ENSMUST00000126945 (Zc3hc1-008) 30374823-30382668 processed_transcript
ENSMUST00000129796 (Zc3hc1-006) 30387345-30391014 nonsense_mediated_decay
ENSMUST00000136255 (Zc3hc1-010) 30372922-30391006 nonsense_mediated_decay
ENSMUST00000138983 (Zc3hc1-009) 30370268-30372980 retained_intron
ENSMUST00000147990 (Zc3hc1-005) 30376003-30390989 nonsense_mediated_decay
ENSMUST00000152101 (Zc3hc1-007) 30384779-30391010 retained_intron
ENSMUST00000152391 (Zc3hc1-004) 30366384-30391002 protein_coding
ENSMUSG00000084861 (1700095J07Rik)
RIKEN cDNA 1700095J07 gene 		ENSMUST00000128017 (1700095J07Rik-002) 30304605-30331779 processed_transcript
ENSMUST00000140275 (1700095J07Rik-001) 30304621-30307768 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DZ_0001ENSG00000091732ENST00000311873ENST00000358303ENST00000360708ENST00000467642ENST00000470651ENST00000471022ENST00000477578ENST00000480193ENST00000481503ENST00000483827ENST00000484432ENSG00000186591ENST00000355621ENST00000463272ENST00000472396ENST00000473814ENST00000480245ENST00000483368ENST00000486283ENST00000490974ENST00000496698CIL_0004DZ_0002ENSMUSG00000039130ENSMUST00000080812ENSMUST00000102992ENSMUST00000115184ENSMUST00000126945ENSMUST00000129796ENSMUST00000136255ENSMUST00000138983ENSMUST00000147990ENSMUST00000152101ENSMUST00000152391ENSMUSG00000084861ENSMUST00000128017ENSMUST00000140275
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DZ_0001ENSG00000091732ENST00000311873ENST00000358303ENST00000360708ENST00000467642ENST00000471022ENST00000477578ENST00000480193ENST00000481503ENST00000484432ENSG00000186591ENST00000355621ENST00000473814CIL_0004DZ_0002ENSMUSG00000039130ENSMUST00000080812ENSMUST00000102992ENSMUST00000115184ENSMUST00000136255ENSMUST00000138983ENSMUST00000152101ENSMUST00000152391ENSMUSG00000084861ENSMUST00000128017ENSMUST00000140275
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091732 ENST00000311873 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A
ENST00000358303 1.211±0.00 3.762±0.00 N/A 2.632±0.00 3.493±0.00 0.396±0.00 4.593±0.00 2.276±0.00 2.459±0.00 N/A 3.787±2.68 4.153±2.53 1.570±0.67 8.599±3.11
ENST00000360708 N/A N/A N/A N/A 0.309±0.00 N/A 0.563±0.00 1.579±1.17 N/A N/A N/A 0.659±0.00 N/A N/A
ENST00000467642 0.555±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471022 N/A N/A 0.369±0.00 N/A 0.674±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477578 N/A N/A 1.006±0.00 N/A N/A N/A N/A N/A N/A N/A 1.307±0.00 N/A N/A N/A
ENST00000480193 N/A N/A N/A 2.030±0.00 N/A N/A 0.703±0.00 N/A 1.702±0.00 N/A 3.944±0.00 0.379±0.00 N/A N/A
ENST00000481503 N/A 1.956±0.00 N/A 0.330±0.00 3.661±0.00 0.710±0.05 1.082±0.00 N/A 1.117±0.81 1.142±0.12 0.605±0.00 3.314±0.00 2.449±1.05 N/A
ENST00000483827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484432 N/A N/A 1.074±0.00 N/A 1.139±0.00 0.817±0.00 N/A N/A N/A 1.195±0.00 N/A N/A N/A N/A
ENSG00000186591 ENST00000355621 17.855±0.00 9.776±0.00 3.814±0.00 19.008±6.24 13.355±11.66 12.768±10.31 13.500±11.95 9.955±7.62 8.693±0.57 16.445±13.48 11.249±8.89 22.279±10.83 23.159±3.51 16.155±3.85
ENST00000463272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.977±0.00 44.665±0.00
ENST00000480245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039130 ENSMUST00000080812 6.824±0.75 3.205±0.98 6.421±0.68 14.967±2.14 4.457±1.21 2.288±0.61 5.234±0.48 4.371±0.66 7.143±4.41 4.882±0.61 6.993±0.46 7.388±3.31 8.105±4.79 6.700±2.49
ENSMUST00000102992 N/A 2.859±0.00 N/A N/A N/A 0.758±0.00 N/A N/A N/A N/A N/A 3.150±0.00 N/A N/A
ENSMUST00000115184 N/A N/A N/A N/A 2.929±0.00 N/A N/A N/A N/A N/A N/A N/A 1.097±0.00 N/A
ENSMUST00000126945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136255 N/A N/A N/A 3.744±0.00 N/A 1.867±0.00 N/A 2.979±0.00 N/A N/A N/A 2.817±0.29 2.789±0.59 1.206±0.00
ENSMUST00000138983 N/A 4.577±1.05 N/A N/A 4.376±0.81 2.549±0.00 N/A N/A N/A 4.664±0.00 N/A 7.013±2.23 N/A N/A
ENSMUST00000147990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152101 N/A N/A N/A 0.275±0.00 0.418±0.00 N/A N/A N/A N/A N/A N/A 0.487±0.00 N/A 0.184±0.00
ENSMUST00000152391 N/A N/A N/A 5.166±0.00 N/A 0.560±0.00 N/A N/A N/A N/A N/A 2.765±0.00 3.033±0.48 N/A
ENSMUSG00000084861 ENSMUST00000128017 N/A 0.067±0.00 N/A 0.015±0.00 0.026±0.00 0.061±0.00 N/A N/A N/A 0.040±0.00 N/A 0.021±0.00 0.005±0.00 0.427±0.19
ENSMUST00000140275 N/A N/A 0.036±0.02 0.017±0.00 N/A N/A 0.068±0.00 N/A N/A N/A N/A 0.040±0.00 0.081±0.05 7.122±2.04

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