C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004E3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091732-ENSG00000128607 CGP 9606 7:130018286-130135720
GeneTranscriptPositionBiotype
ENSG00000091732 (ZC3HC1)
zinc finger, C3HC-type containing 1 		ENST00000311873 (ZC3HC1-201) 130018287-130051451 protein_coding
ENST00000358303 (ZC3HC1-001) 130018286-130051451 protein_coding
ENST00000360708 (ZC3HC1-002) 130018292-130051374 protein_coding
ENST00000467642 (ZC3HC1-003) 130018293-130051374 nonsense_mediated_decay
ENST00000470651 (ZC3HC1-007) 130039507-130051377 nonsense_mediated_decay
ENST00000471022 (ZC3HC1-009) 130023677-130051369 retained_intron
ENST00000477578 (ZC3HC1-005) 130023564-130039626 retained_intron
ENST00000480193 (ZC3HC1-010) 130039275-130051369 protein_coding
ENST00000481503 (ZC3HC1-004) 130018326-130051389 protein_coding
ENST00000483827 (ZC3HC1-006) 130026236-130051374 nonsense_mediated_decay
ENST00000484432 (ZC3HC1-008) 130039519-130051385 nonsense_mediated_decay
ENSG00000128607 (KLHDC10)
kelch domain containing 10 		ENST00000335420 (KLHDC10-001) 130070510-130135720 protein_coding
ENST00000463413 (KLHDC10-003) 130070550-130120769 protein_coding
ENST00000468226 (KLHDC10-005) 130070772-130124534 protein_coding
ENST00000495724 (KLHDC10-004) 130116445-130117666 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0004E3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039130-ENSMUSG00000029775 CGP 10090 6:30366380-30455179
GeneTranscriptPositionBiotype
ENSMUSG00000029775 (Klhdc10)
kelch domain containing 10 		ENSMUST00000068240 (Klhdc10-002) 30401868-30453288 protein_coding
ENSMUST00000068259 (Klhdc10-001) 30401896-30455179 protein_coding
ENSMUST00000123494 (Klhdc10-006) 30417045-30447447 processed_transcript
ENSMUST00000132581 (Klhdc10-005) 30401998-30450562 processed_transcript
ENSMUST00000135566 (Klhdc10-007) 30427396-30441892 retained_intron
ENSMUST00000144272 (Klhdc10-003) 30417036-30450814 processed_transcript
ENSMUST00000150854 (Klhdc10-004) 30443770-30450841 retained_intron
ENSMUSG00000039130 (Zc3hc1)
zinc finger, C3HC type 1 		ENSMUST00000080812 (Zc3hc1-002) 30366380-30391023 protein_coding
ENSMUST00000102992 (Zc3hc1-001) 30366388-30391028 protein_coding
ENSMUST00000115184 (Zc3hc1-003) 30366474-30391010 protein_coding
ENSMUST00000126945 (Zc3hc1-008) 30374823-30382668 processed_transcript
ENSMUST00000129796 (Zc3hc1-006) 30387345-30391014 nonsense_mediated_decay
ENSMUST00000136255 (Zc3hc1-010) 30372922-30391006 nonsense_mediated_decay
ENSMUST00000138983 (Zc3hc1-009) 30370268-30372980 retained_intron
ENSMUST00000147990 (Zc3hc1-005) 30376003-30390989 nonsense_mediated_decay
ENSMUST00000152101 (Zc3hc1-007) 30384779-30391010 retained_intron
ENSMUST00000152391 (Zc3hc1-004) 30366384-30391002 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004E3_0001ENSG00000091732ENST00000311873ENST00000358303ENST00000360708ENST00000467642ENST00000470651ENST00000471022ENST00000477578ENST00000480193ENST00000481503ENST00000483827ENST00000484432ENSG00000128607ENST00000335420ENST00000463413ENST00000468226ENST00000495724CIL_0004E3_0002ENSMUSG00000029775ENSMUST00000068240ENSMUST00000068259ENSMUST00000123494ENSMUST00000132581ENSMUST00000135566ENSMUST00000144272ENSMUST00000150854ENSMUSG00000039130ENSMUST00000080812ENSMUST00000102992ENSMUST00000115184ENSMUST00000126945ENSMUST00000129796ENSMUST00000136255ENSMUST00000138983ENSMUST00000147990ENSMUST00000152101ENSMUST00000152391
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004E3_0001ENSG00000091732ENST00000311873ENST00000358303ENST00000360708ENST00000467642ENST00000471022ENST00000477578ENST00000480193ENST00000481503ENST00000484432ENSG00000128607ENST00000335420ENST00000463413ENST00000468226CIL_0004E3_0002ENSMUSG00000029775ENSMUST00000068240ENSMUST00000068259ENSMUST00000123494ENSMUST00000144272ENSMUSG00000039130ENSMUST00000080812ENSMUST00000102992ENSMUST00000115184ENSMUST00000136255ENSMUST00000138983ENSMUST00000152101ENSMUST00000152391
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091732 ENST00000311873 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A
ENST00000358303 1.211±0.00 3.762±0.00 N/A 2.632±0.00 3.493±0.00 0.396±0.00 4.593±0.00 2.276±0.00 2.459±0.00 N/A 3.787±2.68 4.153±2.53 1.570±0.67 8.599±3.11
ENST00000360708 N/A N/A N/A N/A 0.309±0.00 N/A 0.563±0.00 1.579±1.17 N/A N/A N/A 0.659±0.00 N/A N/A
ENST00000467642 0.555±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471022 N/A N/A 0.369±0.00 N/A 0.674±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477578 N/A N/A 1.006±0.00 N/A N/A N/A N/A N/A N/A N/A 1.307±0.00 N/A N/A N/A
ENST00000480193 N/A N/A N/A 2.030±0.00 N/A N/A 0.703±0.00 N/A 1.702±0.00 N/A 3.944±0.00 0.379±0.00 N/A N/A
ENST00000481503 N/A 1.956±0.00 N/A 0.330±0.00 3.661±0.00 0.710±0.05 1.082±0.00 N/A 1.117±0.81 1.142±0.12 0.605±0.00 3.314±0.00 2.449±1.05 N/A
ENST00000483827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484432 N/A N/A 1.074±0.00 N/A 1.139±0.00 0.817±0.00 N/A N/A N/A 1.195±0.00 N/A N/A N/A N/A
ENSG00000128607 ENST00000335420 N/A N/A 0.819±0.00 0.778±0.00 N/A N/A 0.246±0.00 5.217±1.04 1.203±0.00 N/A N/A 1.049±0.27 0.937±0.03 2.287±0.04
ENST00000463413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.083±0.00
ENST00000468226 N/A N/A N/A 7.592±0.00 6.275±0.00 3.989±0.00 3.315±0.00 N/A 6.627±0.00 N/A N/A 8.544±0.00 N/A 16.086±0.67
ENST00000495724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029775 ENSMUST00000068240 3.322±0.00 N/A N/A 8.719±0.00 N/A 2.119±0.00 N/A N/A N/A N/A N/A 7.170±0.00 4.019±1.31 3.026±1.00
ENSMUST00000068259 6.255±5.43 3.063±0.80 4.619±0.04 38.855±3.55 3.731±2.81 4.078±2.30 5.386±0.16 7.577±2.37 4.544±2.92 3.562±0.73 2.351±1.49 3.136±1.11 6.319±4.22 4.500±1.96
ENSMUST00000123494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.798±3.86
ENSMUST00000132581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.080±3.38
ENSMUST00000150854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039130 ENSMUST00000080812 6.824±0.75 3.205±0.98 6.421±0.68 14.967±2.14 4.457±1.21 2.288±0.61 5.234±0.48 4.371±0.66 7.143±4.41 4.882±0.61 6.993±0.46 7.388±3.31 8.105±4.79 6.700±2.49
ENSMUST00000102992 N/A 2.859±0.00 N/A N/A N/A 0.758±0.00 N/A N/A N/A N/A N/A 3.150±0.00 N/A N/A
ENSMUST00000115184 N/A N/A N/A N/A 2.929±0.00 N/A N/A N/A N/A N/A N/A N/A 1.097±0.00 N/A
ENSMUST00000126945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136255 N/A N/A N/A 3.744±0.00 N/A 1.867±0.00 N/A 2.979±0.00 N/A N/A N/A 2.817±0.29 2.789±0.59 1.206±0.00
ENSMUST00000138983 N/A 4.577±1.05 N/A N/A 4.376±0.81 2.549±0.00 N/A N/A N/A 4.664±0.00 N/A 7.013±2.23 N/A N/A
ENSMUST00000147990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152101 N/A N/A N/A 0.275±0.00 0.418±0.00 N/A N/A N/A N/A N/A N/A 0.487±0.00 N/A 0.184±0.00
ENSMUST00000152391 N/A N/A N/A 5.166±0.00 N/A 0.560±0.00 N/A N/A N/A N/A N/A 2.765±0.00 3.033±0.48 N/A

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